Pre_GI: BLASTP Hits

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Query: NC_010803:483713:488375 Chlorobium limicola DSM 245, complete genome

Start: 488375, End: 489355, Length: 981

Host Lineage: Chlorobium limicola; Chlorobium; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Isolated from Gilroy Hot Spring. The green sulfur bacteria (GSB; Phylum Chlorobi ) are commonly found in illuminated, stratified, and anoxic aquatic environments, sediments, and other sulfide-rich environments including hot springs. This bacterium has been used to model a variety of enzyme and reaction center pathways, including ATP-citrate lyase, isocitrate dehydrogenase, and the reverse Krebs cycle used in photosynthesis. Now called the "reductive carbolic acid cycle", this was found to be the sole carbon dioxide assimilation pathway in other green sulfur bacteria since its discovery.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009337:89631:1043701043701053951026Chlorobium phaeovibrioides DSM 265 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein1e-112406
NC_007512:944941:9599929599929610471056Pelodictyon luteolum DSM 273, complete genomehypothetical protein2e-110399
NC_009337:89631:1064971064971075911095Chlorobium phaeovibrioides DSM 265 chromosome, complete genomehypothetical protein7e-66251
NC_010424:1356000:1368965136896513699751011Candidatus Desulforudis audaxviator MP104C, complete genomeregulatory protein, DeoR2e-59229
NC_015573:2975000:2987424298742429884491026Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometranscriptional regulator-like protein2e-51202
NC_015966:1316901:1317857131785713189001044Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomehelix-turn-helix type 11 domain-containing protein1e-48193
NC_013501:1881692:1906452190645219074951044Rhodothermus marinus DSM 4252, complete genomeHelix-turn-helix type 11 domain protein7e-48191
NC_010546:1175979:119407511940751195073999Cyanothece sp. ATCC 51142 chromosome circular, complete sequencehypothetical protein3e-45182
NC_015577:3589884:360730936073093608295987Treponema azotonutricium ZAS-9 chromosome, complete genomeHTH domain-containing protein3e-40166
NC_007775:723925:742311742311743219909Synechococcus sp. JA-3-3Ab, complete genomehypothetical protein4e-40165
NC_019978:922978:938698938698939693996Halobacteroides halobius DSM 5150, complete genomeputative transcriptional regulator6e-40164
NC_002939:47406:641306413065092963Geobacter sulfurreducens PCA, complete genomehypothetical protein1e-36154
NC_013889:2561381:256394725639472564906960Thioalkalivibrio sp. K90mix chromosome, complete genomeHelix-turn-helix type 11 domain protein6e-37154
NC_014836:993448:101097310109731011938966Desulfurispirillum indicum S5 chromosome, complete genometranscriptional regulator-like protein2e-35149
NC_015578:3371171:3382467338246733834681002Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein2e-35149
NC_015578:2341026:2377935237793523789661032Treponema primitia ZAS-2 chromosome, complete genomeputative helix-turn-helix, type 11 domain-containing protein2e-34146
NC_015578:298989:3008593008593018841026Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein3e-33142
NC_013385:1758383:1772945177294517740031059Ammonifex degensii KC4, complete genomeHelix-turn-helix type 11 domain protein2e-28126
NC_014216:1787000:1801783180178318027871005Desulfurivibrio alkaliphilus AHT2 chromosome, complete genometranscriptional regulator-like protein5e-28125
NC_009483:1116385:111783611178361118828993Geobacter uraniireducens Rf4 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein1e-25117
NC_014011:962474:962883962883963866984Aminobacterium colombiense DSM 12261 chromosome, complete genometranscriptional regulator protein-like protein3e-25115
NC_015578:3694813:3704358370435837053891032Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein1e-24114
NC_011146:3206000:3208479320847932094801002Geobacter bemidjiensis Bem, complete genomeHelix-turn-helix type 11 domain protein3e-24112
NC_013890:1175931:119468111946811195673993Dehalococcoides sp. GT chromosome, complete genomeHelix-turn-helix type 11 domain protein1e-23110
NC_006350:1084930:1091418109141810924401023Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative DeoR family regulatory protein2e-22107
NC_014973:3151701:3173941317394131749421002Geobacter sp. M18 chromosome, complete genomehelix-turn-helix type 11 domain-containing protein1e-22107
NC_013730:1572889:158489615848961585843948Spirosoma linguale DSM 74, complete genomeHelix-turn-helix type 11 domain protein7e-22104
NC_013720:5769910:579703657970365797962927Pirellula staleyi DSM 6068, complete genomeHelix-turn-helix type 11 domain protein5e-21102
NC_015573:2323268:2338673233867323396831011Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometranscriptional regulator4e-2099
NC_012796:3600630:361913636191363620131996Desulfovibrio magneticus RS-1, complete genomehypothetical protein2e-1893.6
NC_007759:2748000:276304127630412764018978Syntrophus aciditrophicus SB, complete genometranscriptional regulator4e-1892.4
NC_012914:336750:336750336750337697948Paenibacillus sp. JDR-2, complete genomeHelix-turn-helix type 11 domain protein6e-1891.7
NC_015977:255029:265855265855266772918Roseburia hominis A2-183 chromosome, complete genomehelix-turn-helix type 11 domain-containing protein8e-1891.3
NC_009973:77518:921039210393098996Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeregulatory protein, DeoR1e-1687.4
NC_012108:616088:619820619820620818999Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator, putative2e-1686.7
NC_013730:5538323:5538323553832355394051083Spirosoma linguale DSM 74, complete genometranscriptional regulator protein-like protein9e-1684.3
NC_017098:477000:4811234811234821451023Spirochaeta africana DSM 8902 chromosome, complete genomeputative transcriptional regulator3e-1582.8
NC_014960:1380500:1389942138994213931483207Anaerolinea thermophila UNI-1, complete genomehypothetical protein7e-1478.2
NC_015387:942974:948848948848949816969Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeputative transcriptional regulator1e-1377.8
NC_015732:3145634:315631631563163157302987Spirochaeta caldaria DSM 7334 chromosome, complete genomehypothetical protein1e-1377
NC_018515:3108755:311124831112483112186939Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator1e-1274.3
NC_007626:1746475:176022417602241761204981Magnetospirillum magneticum AMB-1, complete genomePredicted transcriptional regulator2e-1273.6
NC_016803:198178:221183221183222178996Desulfovibrio desulfuricans ND132 chromosome, complete genometranscriptional regulator3e-1272.8
NC_015388:2143329:2160933216093321619461014Desulfobacca acetoxidans DSM 11109 chromosome, complete genomehypothetical protein3e-1272.8
NC_015172:1161000:118132511813251182239915Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein3e-1272.8
NC_013729:5497814:549928354992835500260978Kribbella flavida DSM 17836, complete genometranscriptional regulator protein-like protein4e-1272.4
NC_015388:1020747:1034148103414810351701023Desulfobacca acetoxidans DSM 11109 chromosome, complete genomehypothetical protein8e-1271.6
NC_012796:3374911:3409646340964634106561011Desulfovibrio magneticus RS-1, complete genomehypothetical protein1e-1171.2
NC_014484:447889:452094452094453080987Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein9e-1271.2
NC_011768:5900500:5933032593303259340391008Desulfatibacillum alkenivorans AK-01, complete genometranscriptional regulator-like protein8e-1168.2
NC_015589:38418:620836208363015933Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeDeoR family transcriptional regulator1e-1067.8
NC_015690:8614000:862124486212448622191948Paenibacillus mucilaginosus KNP414 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein1e-1067.4
NC_016935:789849:798132798132799094963Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator DeoR2e-1067
NC_007626:2204767:224993022499302250916987Magnetospirillum magneticum AMB-1, complete genomePredicted transcriptional regulator3e-1066.2
NC_007503:1885571:190740219074021908382981Carboxydothermus hydrogenoformans Z-2901, complete genomehypothetical protein3e-1066.2
NC_008702:3375027:338766433876643388353690Azoarcus sp. BH72, complete genomeputative transcriptional regulator, deoR-family5e-1065.5
NC_014639:1538782:157149115714911572453963Bacillus atrophaeus 1942 chromosome, complete genomeDeoR family transcriptional regulator6e-1065.1
CP002207:1538782:157149115714911572453963Bacillus atrophaeus 1942, complete genomeDeoR family transcriptional regulator6e-1065.1
NC_014551:2510000:253795525379552538917963Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein9e-1064.7
NC_014762:2428721:243368224336822434560879Sulfuricurvum kujiense DSM 16994 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein1e-0964.3
NC_015321:4287945:429367142936714294360690Fluviicola taffensis DSM 16823 chromosome, complete genomeregulatory protein DeoR2e-0963.5
NC_015690:790500:798606798606799568963Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator DeoR2e-0963.5
NC_015500:1236874:124977012497701250702933Treponema brennaborense DSM 12168 chromosome, complete genomehypothetical protein2e-0963.5
NC_016935:1868839:189117718911771892094918Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein2e-0963.2
NC_014117:442616:508243508243508986744Burkholderia sp. CCGE1002 chromosome chromosome 1, completeHelix-turn-helix type 11 domain protein2e-0963.2
NC_016641:5808113:582551958255195826481963Paenibacillus terrae HPL-003 chromosome, complete genomeDeoR family transcriptional regulator3e-0963.2
NC_003454:1889529:190538719053871906331945Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeTranscriptional regulator, DeoR family3e-0963.2
NC_020272:2077795:209154620915462092460915Bacillus amyloliquefaciens IT-45, complete genomeHTH-type transcriptional regulator YobV4e-0962.8
NC_015690:1348691:136749213674921368409918Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein3e-0962.8
NC_009621:389181:406638406638407618981Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequencetranscriptional regulator4e-0962.4
NC_010830:1038292:106250910625091063198690Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein1e-0861.2
NC_015573:1045877:1062081106208110631961116Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometranscriptional regulator2e-0860.1
NC_009523:5438000:5448155544815554508692715Roseiflexus sp. RS-1 chromosome, complete genomeCRISPR-associated helicase Cas32e-0860.1
NC_016935:4233223:430075343007534301694942Paenibacillus mucilaginosus 3016 chromosome, complete genomehelix-turn-helix type 11 domain-containing protein3e-0859.3
NC_015277:3351504:337463733746373375632996Sphingobacterium sp. 21 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein4e-0859.3
NC_008576:3812500:3818614381861438196241011Magnetococcus sp. MC-1, complete genometranscriptional factor4e-0858.9
NC_007908:3363902:3372013337201333730621050Rhodoferax ferrireducens T118, complete genometranscriptional factor4e-0858.9
NC_009380:1491428:1512341151234115133601020Salinispora tropica CNB-440 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein8e-0858.2
NC_013222:817686:8429998429998440091011Robiginitalea biformata HTCC2501, complete genomehypothetical protein8e-0858.2
NC_013889:1159343:1190311119031111913421032Thioalkalivibrio sp. K90mix chromosome, complete genometranscriptional regulator-like protein7e-0858.2
NC_015601:436822:457563457563458489927Erysipelothrix rhusiopathiae str. Fujisawa, complete genomeputative transcriptional regulator1e-0757.8
NC_015510:4674774:4679637467963746806501014Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomehypothetical protein1e-0757.8
NC_015690:4469775:454444845444484545389942Paenibacillus mucilaginosus KNP414 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein1e-0757.4
NC_014622:653599:659449659449660381933Paenibacillus polymyxa SC2 chromosome, complete genomeDeoR family transcriptional regulator2e-0757
NC_009348:2247500:224951722495172250233717Aeromonas salmonicida subsp. salmonicida A449, complete genomeDeoR family transriptional regulator2e-0757
NC_016048:3063888:308369630836963084625930Oscillibacter valericigenes Sjm18-20, complete genomeputative DeoR family transcriptional regulator2e-0756.6
NC_008789:1393526:1396145139614513971461002Halorhodospira halophila SL1, complete genometranscriptional regulator-like protein3e-0756.2
NC_020054:4161049:4191929419192941930411113Fibrella aestuarina BUZ 2 drat genomehypothetical protein4e-0755.8
NC_013093:2471574:249031724903172491282966Actinosynnema mirum DSM 43827, complete genomeputative transcriptional regulator protein2e-0653.5
NC_013410:1285857:1323280132328013242961017Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein2e-0653.5
NC_013946:305364:305364305364306329966Meiothermus ruber DSM 1279 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein3e-0653.1
NC_014033:3462437:346866934686693469580912Prevotella ruminicola 23 chromosome, complete genomehypothetical protein2e-0653.1
NC_003155:7979050:800019380001938001170978Streptomyces avermitilis MA-4680, complete genomehypothetical protein2e-0653.1
UCMB5137:1594000:161226716122671613205939Bacillus atrophaeus UCMB-5137putative transcriptional regulator6e-0652
NC_016002:2946702:2978327297832729793431017Pseudogulbenkiania sp. NH8B, complete genometranscriptional regulator-like protein6e-0652
NC_013410:2586500:2589148258914825901671020Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein7e-0651.6
NC_015508:296856:309754309754310737984Agrobacterium sp. H13-3 chromosome linear, complete sequenceDeoR family transcriptional regulator8e-0651.6