Pre_GI Gene

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Host: NC_013890 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013890:1175931 Dehalococcoides sp. GT chromosome, complete genome

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11759311176047117hypothetical proteinBLASTP
11761491176271123hypothetical protein
11788071179130324CRISPR-associated protein Cas2QuickGO ontologyBLASTP
11790121179941930CRISPR-associated protein Cas1QuickGO ontologyBLASTP
11799411180570630CRISPR-associated protein Cse3 familyQuickGO ontologyBLASTP
11805951181212618CRISPR-associated protein Cas5 familyQuickGO ontologyBLASTP
118120911824921284CRISPR-associated protein Cse4 familyQuickGO ontologyBLASTP
11824851183018534CRISPR-associated protein Cse2 familyQuickGO ontologyBLASTP
118300811846391632CRISPR-associated protein Cse1 familyQuickGO ontologyBLASTP
118463211873102679CRISPR-associated helicase Cas3QuickGO ontologyBLASTP
11875471188347801hypothetical proteinBLASTP
11887901189128339hypothetical proteinBLASTP
11892501189861612hypothetical protein
118990811913861479hypothetical proteinBLASTP
119152411926301107hypothetical proteinBLASTP
119262711939491323AAA ATPase central domain proteinQuickGO ontologyBLASTP
11940971194567471hypothetical protein
11946811195673993Helix-turn-helix type 11 domain proteinQuickGO ontologyBLASTP
11960461196657612DNA polymerase beta domain protein regionQuickGO ontologyBLASTP
11966321197069438hypothetical proteinBLASTP
11974041197892489hypothetical proteinBLASTP