Pre_GI: BLASTP Hits

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Query: NC_010723:2873886:2886935 Clostridium botulinum E3 str. Alaska E43, complete genome

Start: 2886935, End: 2887414, Length: 480

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was probably isolated from salmon eggs associated with a foodborne case of botulism in Alaska, however the exact details are not available. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010674:3049500:306338830633883063867480Clostridium botulinum B str. Eklund 17B, complete genometranscriptional regulator, AsnC family8e-87318
NC_020291:1810527:181602818160281816507480Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, AsnC family2e-79294
NC_009617:4761000:477468747746874775166480Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeAsnC family transcriptional regulator8e-78288
NC_008261:817295:840440840440840922483Clostridium perfringens ATCC 13124, complete genometranscriptional regulator, AsnC family6e-72269
NC_008262:784878:820431820431820913483Clostridium perfringens SM101, complete genometranscriptional regulator, AsnC family6e-72269
NC_008593:609723:616718616718617200483Clostridium novyi NT, complete genometranscription regulator (Lrp/AsnC family) BH33514e-63239
NC_017208:4845281:486722148672214867718498Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeAsnC family transcriptional regulator5e-36149
NC_014171:4708282:473116047311604731657498Bacillus thuringiensis BMB171 chromosome, complete genomeAsnC family transcriptional regulator5e-36149
NC_013741:424278:425724425724426212489Archaeoglobus profundus DSM 5631, complete genometranscriptional regulator, AsnC family2e-33141
NC_006396:1097000:111935011193501119844495Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceleucine responsive regulatory protein1e-24112
NC_013202:2042776:206226820622682062762495Halomicrobium mukohataei DSM 12286, complete genometranscriptional regulator, AsnC family9e-24108
NC_009831:5107924:510792451079245108403480Shewanella sediminis HAW-EB3, complete genometranscriptional regulator, AsnC family2e-1064.7
NC_013926:614206:633121633121633582462Aciduliprofundum boonei T469 chromosome, complete genometranscriptional regulator, AsnC family6e-0856.6
NC_000961:1481685:148723114872311487686456Pyrococcus horikoshii OT3, complete genometranscriptional regulator2e-0755.1
NC_010995:20181:455864558646134549Cellvibrio japonicus Ueda107, complete genometranscriptional regulator, AsnC family2e-0754.7
NC_007651:3560652:359561335956133596071459Burkholderia thailandensis E264 chromosome I, complete sequencetranscriptional regulator, AsnC family2e-0754.7
NC_006350:3865584:389425138942513894742492Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative AsnC-family transcriptional regulator3e-0754.3
NC_007974:1007834:102370910237091024179471Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, AsnC family5e-0753.5
NC_014752:617987:638017638017638481465Neisseria lactamica ST-640, complete genomeAsnC-family transcriptional regulator8e-0752.8
NC_014828:1905479:191184819118481912300453Ethanoligenens harbinense YUAN-3 chromosome, complete genometranscriptional regulator, AsnC family1e-0652.4
NC_015137:868944:885259885259885741483Burkholderia sp. CCGE1001 chromosome 2, complete sequenceAsnC family transcriptional regulator1e-0652
NC_013887:90929:112143112143112589447Methanocaldococcus sp. FS406-22 chromosome, complete genometranscriptional regulator, AsnC family2e-0652
NC_013926:614206:616364616364616729366Aciduliprofundum boonei T469 chromosome, complete genometranscriptional regulator, AsnC family9e-0649.3