Pre_GI: BLASTP Hits

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Query: NC_010723:173280:175278 Clostridium botulinum E3 str. Alaska E43, complete genome

Start: 175278, End: 175538, Length: 261

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was probably isolated from salmon eggs associated with a foodborne case of botulism in Alaska, however the exact details are not available. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008262:2649289:270080227008022701062261Clostridium perfringens SM101, complete genomeS4 domain protein3e-35147
NC_020291:117983:127176127176127436261Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeribosome-associated heat shock protein implicated in recycling of 50S subunit4e-34143
NC_009922:2850320:286100028610002861242243Alkaliphilus oremlandii OhILAs, complete genomeRNA-binding S4 domain protein9e-28122
NC_009633:168266:184973184973185221249Alkaliphilus metalliredigens QYMF chromosome, complete genomeRNA-binding S4 domain-containing protein1e-24111
NC_009698:3647955:364991836499183650157240Clostridium botulinum A str. Hall chromosome, complete genomeS4 domain-containing protein1e-24111
NC_010516:3845942:384782638478263848065240Clostridium botulinum B1 str. Okra, complete genomeS4 domain protein2e-24110
NC_014614:356746:394652394652394894243Clostridium sticklandii, complete genomeYabO1e-1995.1
NC_014152:191200:197768197768198028261Thermincola sp. JR, complete genomeRNA-binding S4 domain protein1e-1891.7
NC_015760:8914:865586558930276Streptococcus salivarius CCHSS3, complete genomeS4 RNA-binding domain-containing protein2e-1890.9
NC_006448:5046:873887389013276Streptococcus thermophilus LMG 18311, complete genomeconserved hypothetical protein, S4 domain protein2e-1890.9
NC_006449:5046:873887389013276Streptococcus thermophilus CNRZ1066, complete genomeconserved hypothetical protein, S4 domain protein2e-1890.9
NC_016605:272231:272231272231272500270Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeS4 domain-containing protein5e-1889.7
NC_017316:203233:203233203233203565333Enterococcus faecalis OG1RF chromosome, complete genomeheat shock protein5e-1889.7
NC_012121:139741:160951160951161217267Staphylococcus carnosus subsp. carnosus TM300, complete genomeprotein with S4 domain2e-1787.8
NC_007929:1397989:142111314211131421382270Lactobacillus salivarius subsp. salivarius UCC118, complete genomeHeat shock protein 154e-1786.7
NC_007576:1564739:158658615865861586852267Lactobacillus sakei subsp. sakei 23K, complete genomeHypothetical protein with RNA-binding domain S42e-1684.7
NC_016641:1639356:165023416502341650512279Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein8e-1682.4
NC_014483:39729:515225152251800279Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein3e-1580.5
NC_013515:1391143:139386113938611394112252Streptobacillus moniliformis DSM 12112, complete genomeRNA-binding S4 domain protein5e-1373.2
NC_015978:412856:412856412856413143288Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeprotein YabO6e-1372.8
NC_012121:139741:160683160683160949267Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein with S4 domain3e-1167
NC_016751:1524848:154871515487151548951237Marinitoga piezophila KA3 chromosome, complete genomeribosome-associated heat shock protein1e-0961.6
NC_012115:961883:984688984688984933246Nautilia profundicola AmH, complete genomeS4 domain protein3e-0960.8
NC_009615:363285:379752379752380183432Parabacteroides distasonis ATCC 8503 chromosome, complete genomeheat shock protein 153e-0857.4
NC_015501:556994:563263563263563745483Porphyromonas asaccharolytica DSM 20707 chromosome, completeRNA-binding S4 domain protein2e-0651.2