Pre_GI: BLASTP Hits

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Query: NC_010634:2004653:2011407 Yersinia pseudotuberculosis PB1/+, complete genome

Start: 2011407, End: 2011637, Length: 231

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010159:1668795:167816616781661678396231Yersinia pestis Angola, complete genomeDNA polymerase III, theta subunit1e-37155
NC_015566:2039431:204417920441792044409231Serratia sp. AS12 chromosome, complete genomeDNA polymerase II subunit beta2e-26117
NC_015567:2039443:204419120441912044421231Serratia sp. AS9 chromosome, complete genomeDNA polymerase II subunit beta2e-26117
NC_016816:2073677:207640420764042076703300Pantoea ananatis LMG 5342, complete genomeDNA polymerase III subunit theta1e-24111
NC_013421:2306000:231350723135072313737231Pectobacterium wasabiae WPP163, complete genomeDNA polymerase II beta subunit5e-24109
NC_015061:3111211:313222231322223132452231Rahnella sp. Y9602 chromosome, complete genomeDNA polymerase II subunit beta2e-21100
NC_011147:1057259:106083310608331061063231Salmonella enterica subsp. enterica serovar Paratyphi A strDNA polymerase III subunit theta7e-2199.4
NC_011094:1923870:194861519486151948845231Salmonella enterica subsp. enterica serovar Schwarzengrund strDNA polymerase III subunit theta7e-2199.4
NC_011083:1993672:201907520190752019305231Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein7e-2199.4
NC_011080:1944226:197567519756751975905231Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein7e-2199.4
NC_010102:1137247:114082111408211141051231Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-2199.4
NC_003197:1945858:197005419700541970284231Salmonella typhimurium LT2, complete genomeDNA polymerase III theta subunit7e-2199.4
NC_006511:1063249:106682310668231067053231Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCDNA polymerase III, theta subunit7e-2199.4
NC_011205:1345511:134908513490851349315231Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853DNA polymerase III subunit theta7e-2199.4
NC_011294:1220526:122410012241001224330231Salmonella enterica subsp. enterica serovar Enteritidis strDNA polymerase III subunit theta7e-2199.4
NC_017046:1902788:192698519269851927215231Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA polymerase III subunit theta7e-2199.4
NC_016863:1905454:192965019296501929880231Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA polymerase III subunit theta7e-2199.4
NC_016860:1943203:196559519655951965825231Salmonella enterica subsp. enterica serovar Typhimurium strDNA polymerase III subunit theta7e-2199.4
NC_016857:1903426:192762219276221927852231Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA polymerase III subunit theta7e-2199.4
NC_016856:1957263:198145919814591981689231Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA polymerase III subunit theta7e-2199.4
NC_016810:1903426:192762219276221927852231Salmonella enterica subsp. enterica serovar Typhimurium strDNA polymerase III subunit theta7e-2199.4
NC_012125:1897611:190118319011831901413231Salmonella enterica subsp. enterica serovar Paratyphi C strainDNA polymerase III subunit theta7e-2199.4
NC_008258:1873805:188960118896011889831231Shigella flexneri 5 str. 8401, complete genomeDNA polymerase III, theta subunit4e-2096.7
NC_013850:1887556:189114118911411891371231Klebsiella variicola At-22 chromosome, complete genomeDNA polymerase II beta subunit1e-1995.1
NC_012912:2553391:256507825650782565308231Dickeya zeae Ech1591, complete genomeDNA polymerase II beta subunit1e-1994.7
NC_021066:2226826:223724022372402237497258Raoultella ornithinolytica B6, complete genomeDNA polymerase III subunit theta5e-1786.3
NC_011283:4212000:421421442142144214471258Klebsiella pneumoniae 342 chromosome, complete genomeDNA polymerase III subunit theta1e-1685.1
NC_016816:4129299:415676441567644157006243Pantoea ananatis LMG 5342, complete genomeDNA polymerase III subunit theta7e-1682.4
NC_013850:1887556:189492718949271895124198Klebsiella variicola At-22 chromosome, complete genomeDNA polymerase II beta subunit6e-1579.3
NC_009832:2211154:223441522344152234675261Serratia proteamaculans 568, complete genomeDNA polymerase II beta subunit5e-1476.6
NC_014837:2354241:236494223649422365184243Pantoea sp. At-9b chromosome, complete genomeDNA polymerase II subunit beta1e-1272
NC_020181:929000:938898938898939131234Enterobacter aerogenes EA1509E, complete genomeDNA polymerase III theta subunit1e-1065.5
NC_020064:1150982:116006111600611160282222Serratia marcescens FGI94, complete genomeDNA polymerase III, theta subunit4e-1063.2
NC_020418:3102460:310756731075673107791225Morganella morganii subsp. morganii KT, complete genomeDNA polymerase III theta subunit2e-0960.8