Pre_GI: BLASTP Hits

Some Help

Query: NC_010634:1342393:1347093 Yersinia pseudotuberculosis PB1/+, complete genome

Start: 1347093, End: 1347980, Length: 888

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020181:5130513:513750951375095138396888Enterobacter aerogenes EA1509E, complete genomeNgrB1e-124446
NC_015663:549425:566437566437567351915Enterobacter aerogenes KCTC 2190 chromosome, complete genomeHSR1-like GTP-binding protein2e-124445
NC_016902:4236680:4243851424385142448641014Escherichia coli KO11FL chromosome, complete genomeGTP-binding protein HSR1-like protein2e-64246
CP002185:4750571:4768005476800547690181014Escherichia coli W, complete genomePredicted GTPase2e-64246
CP002516:4236680:4243851424385142448641014Escherichia coli KO11, complete genomeGTP-binding protein HSR1-related protein2e-64246
NC_009708:915814:918013918013918888876Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeGTPase2e-56219
NC_013592:3263005:326398732639873264862876Dickeya dadantii Ech586, complete genomeGTP-binding protein HSR1-related protein1e-55216
NC_016612:443398:460493460493461368876Klebsiella oxytoca KCTC 1686 chromosome, complete genomeGTPase3e-55215
NC_016816:1137904:115424211542421155117876Pantoea ananatis LMG 5342, complete genomeGTPase family protein2e-54213
NC_014121:3776902:378788937878893788773885Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completePredicted GTPase1e-51203
NC_020260:882307:897892897892898776885Cronobacter sakazakii Sp291, complete genomeputative GTPase1e-51203
NC_013716:5201097:522755352275535228464912Citrobacter rodentium ICC168, complete genomeputative GTP-binding protein2e-51202
NC_004431:1211000:122440712244071225279873Escherichia coli CFT073, complete genomeHypothetical protein yeeP2e-51202
NC_012912:1053618:108081010808101081676867Dickeya zeae Ech1591, complete genomeGTP-binding protein HSR1-related5e-51201
NC_008253:334467:351386351386352258873Escherichia coli 536, complete genomehypothetical protein6e-51201
NC_017328:3088907:312597531259753126847873Shigella flexneri 2002017 chromosome, complete genomeputative GTPase7e-51201
NC_004741:3041294:307710030771003077972873Shigella flexneri 2a str. 2457T, complete genomehypothetical protein7e-51201
NC_013361:3313284:3324187332418733252631077Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein8e-51200
NC_008253:3161311:316756631675663168438873Escherichia coli 536, complete genomehypothetical protein8e-51200
NC_007946:1119000:113240811324081133280873Escherichia coli UTI89, complete genomehypothetical protein2e-50199
NC_013592:446092:465509465509466375867Dickeya dadantii Ech586, complete genomeGTP-binding protein HSR1-related protein2e-50199
NC_004337:3049118:308627030862703087142873Shigella flexneri 2a str. 301, complete genomehypothetical protein6e-50197
NC_011283:4966471:498842449884244989299876Klebsiella pneumoniae 342 chromosome, complete genomeGTPase family protein8e-50197
NC_013421:1505176:150699515069951507870876Pectobacterium wasabiae WPP163, complete genomeGTP-binding protein HSR1-related protein9e-50197
NC_012917:3241196:326166632616663262541876Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeGTP-binding protein HSR1-related2e-49196
NC_004431:3409389:349060834906083491480873Escherichia coli CFT073, complete genomeHypothetical protein yeeP2e-49196
NC_011415:308825:321721321721322596876Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-49196
NC_013353:5272863:528447952844795285354876Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein8e-49194
AP010958:5272863:528447952844795285354876Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein8e-49194
NC_014618:4114004:412456441245644125427864Enterobacter cloacae SCF1 chromosome, complete genomeGTP-binding protein HSR1-like protein9e-48190
NC_020418:116500:134409134409135272864Morganella morganii subsp. morganii KT, complete genomeputative GTP-binding protein2e-47189
NC_000913:2746886:276573227657322766595864Escherichia coli K12, complete genomeCP4-57 prophage; predicted GTP-binding protein9e-47187
AC_000091:2747520:276636627663662767229864Escherichia coli W3110 DNA, complete genomepredicted GTP-binding protein9e-47187
NC_010473:2839902:285749728574972858360864Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; predicted GTP-binding protein9e-47187
NC_012759:2633949:265154426515442652407864Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage; putative GTP-binding protein9e-47187
NC_014618:690056:718630718630719493864Enterobacter cloacae SCF1 chromosome, complete genomeGTP-binding protein HSR1-like protein8e-45181
NC_011750:4775770:477969247796924780576885Escherichia coli IAI39 chromosome, complete genomeputative GTPase8e-44177
NC_011745:3405520:341935134193513420235885Escherichia coli ED1a chromosome, complete genomeputative GTPase9e-44177
NC_008253:4817864:483019048301904831074885Escherichia coli 536, complete genomehypothetical protein2e-43176
NC_007946:4875997:488969248896924890576885Escherichia coli UTI89, complete genomehypothetical protein2e-43176
NC_004431:4319152:433443443344344335318885Escherichia coli CFT073, complete genomehypothetical protein4e-43175
NC_011750:4390000:440741744074174408301885Escherichia coli IAI39 chromosome, complete genomeputative GTPase6e-43174
NC_008563:4707826:471356147135614714445885Escherichia coli APEC O1, complete genomeputative GTPase7e-43174
NC_011083:4547825:457015245701524571036885Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative GTPase8e-42171
NC_015663:1:289722897229865894Enterobacter aerogenes KCTC 2190 chromosome, complete genomeGTP-binding protein4e-41168
NC_005085:1269787:127396712739671274848882Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein8e-38157
NC_016612:2009927:204213720421372043027891Klebsiella oxytoca KCTC 1686 chromosome, complete genomeGTP-binding protein1e-35150
NC_015663:1356982:137405013740501374943894Enterobacter aerogenes KCTC 2190 chromosome, complete genomeGTP-binding protein2e-35149
NC_016002:2946702:296701629670162967630615Pseudogulbenkiania sp. NH8B, complete genomeHSR1-like GTP-binding protein5e-34145
CU928145:2973968:299136929913692991668300Escherichia coli 55989 chromosome, complete genomeputative GTP-binding factor (fragment) from putative CP4-like prophage3e-1685.9
NC_011748:2973968:299136929913692991668300Escherichia coli 55989, complete genomeputative GTP-binding factor (fragment) from putative CP4-like prophage3e-1685.9
NC_010334:2090990:2101631210163121032471617Shewanella halifaxensis HAW-EB4, complete genomeGTP-binding protein HSR1-related4e-0755.8