Pre_GI: BLASTP Hits

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Query: NC_010634:1175404:1194695 Yersinia pseudotuberculosis PB1/+, complete genome

Start: 1194695, End: 1195528, Length: 834

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009074:3163362:317870731787073179549843Burkholderia pseudomallei 668 chromosome I, complete sequenceNAD-dependent epimerase/dehydratase family protein1e-43176
NC_009076:3179662:319500731950073195849843Burkholderia pseudomallei 1106a chromosome I, complete sequenceNAD-dependent epimerase/dehydratase family protein2e-43176
NC_006350:3329477:334482233448223345664843Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative capsular polysaccharide biosynthesis protein2e-43176
NC_009080:2123987:213933221393322140174843Burkholderia mallei NCTC 10247 chromosome II, complete sequenceputative capsular polysaccharide biosynthesis protein2e-43176
NC_006348:2372945:238829023882902389132843Burkholderia mallei ATCC 23344 chromosome 1, complete sequencecapsular polysaccharide biosynthesis protein, putative2e-43176
NC_007434:3588081:360342636034263604268843Burkholderia pseudomallei 1710b chromosome I, complete sequenceWcbJ2e-43176
NC_008785:516500:534746534746535468723Burkholderia mallei SAVP1 chromosome II, complete sequenceputative capsular polysaccharide biosynthesis protein9e-38157
NC_015565:2736500:275306227530622753919858Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completedTDP-4-dehydrorhamnose reductase4e-1168.9
NC_007205:499808:518270518270519133864Candidatus Pelagibacter ubique HTCC1062, complete genomeNAD dependent epimerase/dehydratase family1e-0963.5
NC_008711:3454359:3461696346169634631291434Arthrobacter aurescens TC1, complete genomedTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase2e-0963.2
NC_020054:1002906:102565710256571026607951Fibrella aestuarina BUZ 2 drat genomeputative UDP-glucose epimerase ytcB2e-0962.8
NC_014735:199434:204200204200205105906Halogeometricum borinquense DSM 11551 plasmid pHBOR01, completedTDP-4-dehydrorhamnose reductase2e-0962.8
NC_006582:3827844:384361838436183844463846Bacillus clausii KSM-K16, complete genomedTDP-4-dehydrorhamnose reductase3e-0962.8
NC_012214:1588573:161129416112941612229936Erwinia pyrifoliae Ep1/96, complete genomeNAD-dependent epimerase/dehydratase family protein4e-0962
NC_015942:1167785:118731711873171188315999Acidithiobacillus ferrivorans SS3 chromosome, complete genomeUDP-glucose 4-epimerase6e-0961.6
NC_014820:1057826:105874610587461059645900Cenarchaeum symbiosum A, complete genomenucleoside-diphosphate-sugar epimerase7e-0961.2
NC_010505:1264758:129005712900571290989933Methylobacterium radiotolerans JCM 2831, complete genomeNAD-dependent epimerase/dehydratase1e-0860.8
NC_008787:1345988:134598813459881346926939Campylobacter jejuni subsp. jejuni 81-176, complete genomeHrEpiB1e-0860.5
NC_013743:1281500:128500512850051285919915Haloterrigena turkmenica DSM 5511, complete genomeNAD-dependent epimerase/dehydratase1e-0860.5
NC_002163:1354215:136119113611911362132942Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomeputative sugar-nucleotide epimerase/dehydratease3e-0859.3
NC_010337:803748:827889827889828821933Heliobacterium modesticaldum Ice1, complete genomenad dependent epimerase/dehydratase family3e-0859.3
NC_013961:2260250:227488922748892275824936Erwinia amylovora, complete genomeNAD-dependent epimerase/dehydratase family protein3e-0859.3
NC_013971:2297777:231241623124162313351936Erwinia amylovora ATCC 49946 chromosome, complete genomeUDP-glucose epimerase3e-0859.3
NC_002695:2769387:278872927887292789724996Escherichia coli O157:H7 str. Sakai, complete genomeputative UDP-galactose 4-epimerase5e-0858.5
CU928145:2324495:234348923434892344484996Escherichia coli 55989 chromosome, complete genomeUDP-N-acetylglucosamine 4-epimerase (UDP-GlcNAc 4-epimerase)5e-0858.5
NC_002655:2839600:285894328589432859938996Escherichia coli O157:H7 EDL933, complete genomeputative UDP-galactose 4-epimerase5e-0858.5
NC_010468:1775000:177908517790851780080996Escherichia coli ATCC 8739, complete genomeNAD-dependent epimerase/dehydratase5e-0858.5
NC_011748:2324495:234348923434892344484996Escherichia coli 55989, complete genomeUDP-N-acetylglucosamine 4-epimerase (UDP-GlcNAc 4-epimerase)5e-0858.5
NC_010498:1035406:104101610410161042011996Escherichia coli SMS-3-5, complete genomeUDP-N-acetylglucosamine 4-epimerase5e-0858.5
NC_010658:1090104:109591810959181096913996Shigella boydii CDC 3083-94, complete genomeUDP-N-acetylglucosamine 4-epimerase5e-0858.5
CU928160:2155947:217411521741152175110996Escherichia coli IAI1 chromosome, complete genomeUDP-N-acetylglucosamine 4-epimerase (UDP-GlcNAc 4-epimerase)5e-0858.5
NC_011353:2734222:275356427535642754559996Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeUDP-N-acetylglucosamine 4-epimerase5e-0858.5
NC_011601:2211917:223361622336162234611996Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeUDP-galactose 4-epimerase5e-0858.5
NC_011741:2155947:217411521741152175110996Escherichia coli IAI1 chromosome, complete genomeUDP-N-acetylglucosamine 4-epimerase (UDP-GlcNAc 4-epimerase)5e-0858.5
NC_013008:2733203:275254527525452753540996Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeUDP-N-acetylglucosamine 4-epimerase5e-0858.5
NC_013941:2544569:256931625693162570311996Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeUDP-N-acetylglucosamine 4-epimerase5e-0858.5
NC_016935:634500:657888657888658739852Paenibacillus mucilaginosus 3016 chromosome, complete genomedTDP-4-dehydrorhamnose reductase5e-0858.5
NC_011745:2302979:232202923220292323024996Escherichia coli ED1a chromosome, complete genomeUDP-N-acetylglucosamine 4-epimerase (UDP-GlcNAc 4-epimerase)5e-0858.5
NC_020210:3341976:339622033962203397062843Geobacillus sp. GHH01, complete genomeputative dTDP-4-dehydrorhamnose reductase4e-0858.5
NC_009707:1551412:155177915517791552720942Campylobacter jejuni subsp. doylei 269.97 chromosome, completeHrEpiB7e-0858.2
NC_011761:1155636:115885611588561159854999Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeUDP-glucose 4-epimerase1e-0757.4
NC_009778:1141716:114741411474141148409996Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-0757.4
NC_015666:1623790:164662216466221647545924Halopiger xanaduensis SH-6 chromosome, complete genomeUDP-glucose 4-epimerase1e-0757.4
NC_015761:2062345:207908920790892080084996Salmonella bongori NCTC 12419, complete genomeudp-N-acetylglucosamine 4-epimerase1e-0757
NC_012622:517436:537522537522538349828Sulfolobus islandicus Y.G.57.14 chromosome, complete genomedTDP-4-dehydrorhamnose reductase2e-0757
NC_008261:551513:570133570133571017885Clostridium perfringens ATCC 13124, complete genomedTDP-4-dehydrorhamnose reductase2e-0756.6
NC_013769:961072:968235968235969059825Sulfolobus islandicus L.D.8.5 chromosome, complete genomedTDP-4-dehydrorhamnose reductase2e-0756.6
NC_010803:2067539:208461120846112085603993Chlorobium limicola DSM 245, complete genomeNAD-dependent epimerase/dehydratase5e-0755.1
NC_010465:3465351:347561934756193476578960Yersinia pseudotuberculosis YPIII, complete genomeNAD-dependent epimerase/dehydratase5e-0755.1
NC_015634:359500:382083382083382928846Bacillus coagulans 2-6 chromosome, complete genomeDTDP-4-dehydrorhamnose reductase5e-0755.1
NC_016620:341699:345712345712346686975Bacteriovorax marinus SJ, complete genomeUDP-glucose 4-epimerase6e-0754.7
NC_004603:230000:237008237008237880873Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative dTDP-4-dehydrorhamnose reductase7e-0754.7
NC_016627:3295008:329914532991453300005861Clostridium clariflavum DSM 19732 chromosome, complete genomedTDP-4-dehydrorhamnose reductase7e-0754.7
NC_015682:379373:396910396910397893984Thermodesulfobacterium sp. OPB45 chromosome, complete genomeUDP-glucose 4-epimerase1e-0654.3
NC_013422:1604157:160995116099511610871921Halothiobacillus neapolitanus c2, complete genomedTDP-4-dehydrorhamnose reductase2e-0653.5
NC_017986:1155811:117144511714451172431987Pseudomonas putida ND6 chromosome, complete genomeUDP-glucose 4-epimerase2e-0653.5
NC_007712:4067500:407626840762684076822555Sodalis glossinidius str. 'morsitans', complete genomeputative sugar-nucleotide epimerase/dehydratase1e-0653.5
NC_014374:669356:669356669356670207852Acidilobus saccharovorans 345-15 chromosome, complete genomeDTDP-4-dehydrorhamnose reductase2e-0653.1
NC_015385:965341:968804968804969784981Treponema succinifaciens DSM 2489 chromosome, complete genomeUDP-glucose 4-epimerase3e-0652.8
NC_017243:314000:335241335241336233993Brachyspira intermedia PWS/A chromosome, complete genomeUDP-glucose 4-epimerase3e-0652.8
NC_014098:850000:856037856037856897861Bacillus tusciae DSM 2912 chromosome, complete genomedTDP-4-dehydrorhamnose reductase3e-0652.4
NC_009253:3272000:329599232959923296843852Desulfotomaculum reducens MI-1 chromosome, complete genomedTDP-4-dehydrorhamnose reductase4e-0652
NC_009337:715500:7519257519257529291005Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeNAD-dependent epimerase/dehydratase4e-0652
NC_014150:1902241:191671319167131917705993Brachyspira murdochii DSM 12563 chromosome, complete genomeUDP-glucose 4-epimerase5e-0652
NC_010939:1633000:164136416413641642239876Actinobacillus pleuropneumoniae serovar 7 str. AP76, completedTDP-4-dehydrorhamnose reductase8e-0651.2
NC_009092:1599526:161577416157741616640867Shewanella loihica PV-4, complete genomedTDP-4-dehydrorhamnose reductase8e-0651.2
NC_019978:2364000:238208323820832382919837Halobacteroides halobius DSM 5150, complete genomedTDP-4-dehydrorhamnose reductase9e-0651.2