Pre_GI: BLASTP Hits

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Query: NC_010612:4501414:4519691 Mycobacterium marinum M, complete genome

Start: 4519691, End: 4520488, Length: 798

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016768:1769332:176933217693321770129798Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein6e-132469
NC_012943:1769445:176944517694451770242798Mycobacterium tuberculosis KZN 1435 chromosome, complete genomeDNA repair protein RecO6e-132469
NC_009525:2635792:265542926554292656226798Mycobacterium tuberculosis H37Ra, complete genomeDNA repair protein RecO6e-132469
NC_015848:2684275:270207427020742702871798Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein6e-132469
NC_016887:1680338:169356116935611694340780Nocardia cyriacigeorgica GUH-2, complete genomeDNA repair protein recO (Recombination protein O)6e-96350
NC_006087:1483761:149999114999911500740750Leifsonia xyli subsp. xyli str. CTCB07, complete genomeDNA repair protein RecO1e-58226
NC_015957:8845274:885938088593808860138759Streptomyces violaceusniger Tu 4113 chromosome, complete genomeDNA repair protein recO1e-57223
NC_010617:1428902:144945414494541450212759Kocuria rhizophila DC2201, complete genomeDNA repair protein RecO3e-53208
NC_014643:2056280:213785821378582138625768Rothia dentocariosa ATCC 17931 chromosome, complete genomerecombination protein O1e-27123
NC_009633:3055413:305776730577673058507741Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA repair protein RecO2e-1583.2
NC_011146:3206000:322908932290893229742654Geobacter bemidjiensis Bem, complete genomeDNA repair protein RecO1e-1377
NC_006322:2592176:261616126161612616931771Bacillus licheniformis ATCC 14580, complete genomeDNA repair protein RecO2e-1376.3
NC_014623:6150028:618223861822386182972735Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDNA repair protein RecO2e-0962.8
NC_012483:656397:675950675950676705756Acidobacterium capsulatum ATCC 51196, complete genomeDNA repair protein RecO3e-0962.4
NC_002939:579087:606305606305607036732Geobacter sulfurreducens PCA, complete genomeDNA repair protein RecO6e-0961.2
NC_014972:3000138:300724430072443008014771Desulfobulbus propionicus DSM 2032 chromosome, complete genomeDNA repair protein RecO2e-0859.7