Pre_GI: BLASTP Hits

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Query: NC_010610:535790:556765 Lactobacillus fermentum IFO 3956, complete genome

Start: 556765, End: 558027, Length: 1263

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012984:1027898:1043899104389910452811383Lactobacillus plantarum JDM1, complete genomecapsid protein6e-97354
NC_002662:447236:4681374681374694501314Lactococcus lactis subsp. lactis Il1403, complete genomecapsid protein2e-88326
NC_016052:1818659:1837911183791118391701260Tetragenococcus halophilus NBRC 12172, complete genomeputative capsid protein7e-1995.5
NC_013766:679906:6989306989307000991170Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein2e-1894
NC_003212:2592600:2601387260138726025741188Listeria innocua Clip11262, complete genomehypothetical protein8e-1892
NC_008555:1204000:1229544122954412307281185Listeria welshimeri serovar 6b str. SLCC5334, complete genomephage capsid protein5e-1789.4
NC_002662:1042546:1056510105651010577031194Lactococcus lactis subsp. lactis Il1403, complete genomecapsid protein7e-1788.6
NC_013198:1538792:1545808154580815477361929Lactobacillus rhamnosus GG, complete genomephage protein, prohead protease6e-1582.4
NC_010471:1081590:1098162109816210993251164Leuconostoc citreum KM20, complete genomemajor head protein-like protein6e-1582.4
NC_006270:3418097:3447654344765434489371284Bacillus licheniformis ATCC 14580, complete genomehypothetical phagelike protein1e-1377.8
NC_006322:3418268:3447825344782534491081284Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-1377.8
NC_012471:781063:8055998055998067861188Streptococcus equi subsp. equi 4047, complete genomephage major capsid protein3e-1377
NC_009332:1269000:1286673128667312878601188Streptococcus pyogenes str. Manfredo chromosome, complete genomephage major capsid protein3e-1376.6
NC_008021:531730:5528195528195540181200Streptococcus pyogenes MGAS9429, complete genomephage protein3e-1376.6
NC_007795:2034000:2052003205200320532501248Staphylococcus aureus subsp. aureus NCTC 8325, complete genomephage major capsid protein, HK97 family3e-1273.2
NC_003923:2053510:2066761206676120680081248Staphylococcus aureus subsp. aureus MW2, complete genomecapsid protein3e-1273.2
NC_002953:2032278:2046007204600720472541248Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative capsid protein3e-1273.2
NC_017351:2074000:2090682209068220919291248Staphylococcus aureus subsp. aureus 11819-97 chromosome, completephage major capsid protein, HK97 family3e-1273.2
NC_017337:1990298:1993374199337419946211248Staphylococcus aureus subsp. aureus ED133 chromosome, completePhage capsid protein7e-1272.4
NC_014136:329484:3483303483303494931164Leuconostoc kimchii IMSNU11154 chromosome, complete genomehypothetical protein1e-1171.2
NC_013199:845000:8686348686348698361203Lactobacillus rhamnosus Lc 705, complete genomephage protein, major head protein1e-1068.2
NC_015428:1544728:1569591156959115708321242Lactobacillus buchneri NRRL B-30929 chromosome, complete genomephage major capsid protein, HK97 family2e-0860.8
NC_008261:1787345:1801706180170618028901185Clostridium perfringens ATCC 13124, complete genomephage major capsid protein, HK97 family9e-0755.1
NC_014915:2963500:2984612298461229857181107Geobacillus sp. Y412MC52 chromosome, complete genomephage major capsid protein, HK97 family2e-0653.9
NC_013411:597235:6182176182176193231107Geobacillus sp. Y412MC61, complete genomephage major capsid protein, HK97 family2e-0653.9
NC_016791:1341858:1350301135030113514551155Clostridium sp. BNL1100 chromosome, complete genomephage major capsid protein, HK97 family5e-0652.8