Pre_GI: BLASTP Hits

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Query: NC_010519:1963256:1979596 Haemophilus somnus 2336 chromosome, complete genome

Start: 1979596, End: 1980798, Length: 1203

Host Lineage: Histophilus somni; Histophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: This strain was isolated from the lung of a calf which had pneumonia. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism is a major cause of disease in feedlot cattle. It causes constriction of blood vessels supplying major organs, restricting blood supply which leads to reduced oxygen delivery, and leads to tissue damage and death. The diseases that result are pneumonia, arthritis, myocarditis (inflammation of heart muscle), and reproductive problems resulting in the loss of millions of dollars in animals each year.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011749:34056:4355043550448031254Escherichia coli UMN026 plasmid p1ESCUM, complete sequencetetracycline efflux transporter1e-90333
NC_020418:448687:4588664588664600711206Morganella morganii subsp. morganii KT, complete genomemajor facilitator superfamily protein2e-90333
NC_017171:280762:2856542856542868891236Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeTetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter)1e-90333
NC_003384:157158:1779351779351791401206Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidtetracycline resistance protein1e-90333
NC_011083:4547825:4606940460694046081451206Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,tetracycline resistance protein, class B1e-90333
NC_013365:92973:9669896698979031206Escherichia coli O111:H- str. 11128 plasmid pO111_1, completetetracycline resistance protein TetB1e-90333
NC_016860:4055117:4063086406308640642911206Salmonella enterica subsp. enterica serovar Typhimurium strtetracycline resistance protein1e-90333
NC_017328:1075535:1106058110605811072631206Shigella flexneri 2002017 chromosome, complete genomeTetracycline resistance protein, class B (TetA(B)) (Metal- tetracycline/H(+) antiporter)1e-90333
NC_017328:1075535:1119452111945211206571206Shigella flexneri 2002017 chromosome, complete genomeTetracycline resistance protein, class B (TetA(B)) (Metal- tetracycline/H(+) antiporter)1e-90333
CU928145:4950723:4974007497400749752601254Escherichia coli 55989 chromosome, complete genomeTetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter)1e-90333
NC_011748:4950723:4974007497400749752601254Escherichia coli 55989, complete genomeTetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter)1e-90333
NC_017387:247462:2876772876772888701194Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometetracycline resistance protein, class G (TETA(G))7e-89327
NC_010939:405477:4158074158074169461140Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTetracycline resistance protein, class G7e-83307
NC_009838:81913:8960389603907931191Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceTetA6e-79295
NC_009349:3396:4109410953261218Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completetetracycline resistance protein TetA(E)4e-78292
NC_010410:3606826:3671432367143236726071176Acinetobacter baumannii AYE, complete genomeTetracycline resistance protein, class G (TETA(G))7e-78291
NC_012668:3037345:3048365304836530496391275Vibrio cholerae MJ-1236 chromosome 1, complete sequenceTetA7e-71268
NC_010410:3606826:3641859364185936431331275Acinetobacter baumannii AYE, complete genomeTetracycline resistance protein, class A (TETA(A))7e-71268
NC_011586:268927:2922162922162933431128Acinetobacter baumannii AB0057 chromosome, complete genometetracycline resistance protein, class A2e-63243
NC_015277:380624:3984053984053996131209Sphingobacterium sp. 21 chromosome, complete genomemajor facilitator superfamily MFS_11e-41171
NC_015161:2060369:2064492206449220657331242Deinococcus proteolyticus MRP chromosome, complete genomemajor facilitator superfamily MFS_14e-41169
NC_013062:627000:6750276750276762621236Flavobacteriaceae bacterium 3519-10, complete genomeTetracycline efflux protein TetA2e-37156
NC_005823:2840000:2861270286127028624991230Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130permease4e-32139
NC_003919:5056650:5075447507544750767121266Xanthomonas axonopodis pv. citri str. 306, complete genometetracycline-efflux transporter2e-28127
NC_009483:936000:9406069406069418441239Geobacter uraniireducens Rf4 chromosome, complete genomemajor facilitator transporter1e-1894.4
NC_003210:870587:8705878705878718071221Listeria monocytogenes EGD-e, complete genomehypothetical protein2e-1893.6
NC_013766:906550:9065509065509077701221Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein2e-1893.6
NC_012032:448161:4525394525394537501212Chloroflexus sp. Y-400-fl, complete genomemajor facilitator superfamily MFS_11e-1791.3
NC_012962:3060063:3078973307897330802381266Photorhabdus asymbiotica, complete genomesimilar to tetracycline-efflux transporter9e-1788.2
NC_017195:2498113:2523659252365925248611203Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completemultidrug resistance protein 23e-1686.7
NC_016047:2658000:2682573268257326837751203Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completemultidrug resistance protein 26e-1685.5
NC_014976:684000:7008387008387020401203Bacillus subtilis BSn5 chromosome, complete genomeefflux transporter6e-1685.5
NC_005126:2222000:2225254222525422265191266Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-1584.3
NC_000964:2702376:2716199271619927174011203Bacillus subtilis subsp. subtilis str. 168, complete genomemultidrug-efflux transporter2e-1584
UCMB5137:1:2696926969281711203Bacillus atrophaeus UCMB-5137efflux transporter2e-1583.6
NC_019896:1483073:1508442150844215096441203Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeMultidrug resistance protein 23e-1583.6
NC_003909:927955:9473589473589485601203Bacillus cereus ATCC 10987, complete genomemultidrug resistance protein3e-1583.2
NC_014041:3662906:3676002367600236772161215Zunongwangia profunda SM-A87 chromosome, complete genomemultidrug-efflux transporter6e-1582
NC_020244:2509000:2531624253162425328261203Bacillus subtilis XF-1, complete genomeefflux transporter3e-1480.1
NC_013222:299683:3503113503113515251215Robiginitalea biformata HTCC2501, complete genomemultidrug-efflux transporter3e-1376.6
NC_014479:2505823:2524216252421625254181203Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeefflux transporter1e-1274.7
NC_002932:937157:9410909410909423581269Chlorobium tepidum TLS, complete genomedrug resistance protein, putative1e-1274.7
NC_010175:448020:4523984523984536081211Chloroflexus aurantiacus J-10-fl, complete genome2e-1273.9
NC_005042:1719055:1719055171905517203141260Prochlorococcus marinus subsp. marinus str. CCMP1375, completePermease of the major facilitator superfamily4e-1272.8
NC_005070:2374850:2395742239574223970401299Synechococcus sp. WH 8102, complete genomemultidrug efflux transporter, MFS family9e-1168.2
NC_014759:2438492:2449510244951024507451236Marivirga tractuosa DSM 4126 chromosome, complete genomemajor facilitator superfamily mfs_11e-1067.8
NC_009091:1598044:1613061161306116143291269Prochlorococcus marinus str. MIT 9301, complete genomemultidrug efflux transporter, MFS family7e-1065.5
NC_015761:1488807:1498916149891615001541239Salmonella bongori NCTC 12419, complete genomemultidrug efflux protein1e-0964.7
NC_007355:970670:9840039840039853521350Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceclass H tetracycline resistance efflux protein1e-0861.6
NC_011094:1584038:1588857158885715900981242Salmonella enterica subsp. enterica serovar Schwarzengrund strmajor facilitator superfamily protein3e-0860.1
NC_009481:2081500:2086183208618320873761194Synechococcus sp. WH 7803 chromosome, complete genomemajor facilitator superfamily permease1e-0655.1
NC_006177:2883476:2885225288522528864451221Symbiobacterium thermophilum IAM 14863, complete genomemultidrug efflux protein2e-0653.9