Pre_GI: BLASTP Hits

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Query: NC_010501:2609567:2642531 Pseudomonas putida W619, complete genome

Start: 2642531, End: 2643595, Length: 1065

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:2505233:2539690253969025407721083Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein7e-87320
NC_007963:3113739:3123987312398731251201134Chromohalobacter salexigens DSM 3043, complete genomeputative ammonia monooxygenase2e-43177
NC_021066:1778000:1794175179417517952301056Raoultella ornithinolytica B6, complete genomeaidB regulatorAbrB5e-37155
NC_012967:707083:7275087275087285541047Escherichia coli B str. REL606 chromosome, complete genomeputative regulator2e-33143
CP002185:794732:8173858173858184311047Escherichia coli W, complete genomepredicted regulator2e-33142
NC_016857:775649:7941827941827952281047Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transport protein2e-32140
NC_016856:776735:7952687952687963141047Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transport protein2e-32140
NC_003197:776238:7947717947717958171047Salmonella typhimurium LT2, complete genomeputative transport protein2e-32140
NC_011080:780850:7993827993828004281047Salmonella enterica subsp. enterica serovar Newport str. SL254,protein AbrB2e-32140
NC_016860:816000:8336018336018346471047Salmonella enterica subsp. enterica serovar Typhimurium strprotein AbrB2e-32140
NC_016863:776734:7952677952677963131047Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transport protein2e-32140
NC_017046:775636:7941687941687952141047Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-32140
NC_011094:842038:8605208605208615661047Salmonella enterica subsp. enterica serovar Schwarzengrund strprotein AbrB2e-32140
NC_011083:824659:8431808431808442261047Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,protein AbrB1e-32140
NC_006511:2090058:2094729209472920957751047Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-32140
NC_011147:2085241:2089912208991220909581047Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-32140
NC_016832:2201860:2207264220726422083101047Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-31137
NC_003198:751779:7695517695517705971047Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-31137
NC_004631:2205821:2210492221049222115381047Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-31137
NC_010102:2322866:2328270232827023293161047Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-31136
NC_016810:775649:794182794182795144963Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-31135
NC_015663:4447984:4467534446753444685711038Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative transport protein1e-30134
NC_012731:2261787:2261787226178722628391053Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative transport protein4e-30132
NC_011666:1923776:1923776192377619248761101Methylocella silvestris BL2, complete genomemembrane protein AbrB duplication8e-22104
NC_017059:2739015:2761100276110027623561257Rhodospirillum photometricum DSM 122, complete genomePutative ammonia monooxygenase3e-21102
NC_015410:3093465:3124656312465631257621107Pseudomonas mendocina NK-01 chromosome, complete genomemembrane protein AbrB duplication4e-1582.8
NC_016147:3349272:3349272334927233503661095Pseudoxanthomonas spadix BD-a59 chromosome, complete genomemembrane protein4e-1376.3
NC_009921:5400663:5414382541438254154581077Frankia sp. EAN1pec, complete genomeputative ammonia monooxygenase2e-0860.8