Pre_GI: BLASTP Hits

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Query: NC_010407:2406113:2419736 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 2419736, End: 2420119, Length: 384

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021177:1736854:176822117682211768559339Streptomyces fulvissimus DSM 40593, complete genomeChorismate mutase9e-32135
NC_016114:5539021:554730755473075547630324Streptomyces flavogriseus ATCC 33331 chromosome, complete genomechorismate mutase7e-31132
NC_013929:7606749:761466376146637615097435Streptomyces scabiei 87.22 chromosome, complete genomechorismate mutase2e-30131
NC_010572:6463939:647131464713146471676363Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative chorismate mutase2e-30130
NC_015957:8103472:811947581194758119828354Streptomyces violaceusniger Tu 4113 chromosome, complete genomechorismate mutase3e-30130
NC_003155:7453994:745918874591887459577390Streptomyces avermitilis MA-4680, complete genomechorismate mutase5e-30129
NC_018750:1835500:184486018448601845174315Streptomyces venezuelae ATCC 10712, complete genomeChorismate mutase I3e-29127
NC_013715:699400:704904704904705356453Rothia mucilaginosa DY-18, complete genomechorismate mutase2e-28124
NC_003911:3453764:345376434537643454060297Silicibacter pomeroyi DSS-3, complete genomechorismate mutase4e-2199.8
NC_015573:2323268:2345906234590623471711266Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomePrephenate dehydratase2e-1064.7
NC_012913:626449:6504936504936516171125Aggregatibacter aphrophilus NJ8700, complete genomechorismate mutase/prephenate dehydrogenase8e-0855.8
NC_006905:2805877:2827581282758128287021122Salmonella enterica subsp. enterica serovar Choleraesuis strchorismate mutase T/prephenate dehydrogenase2e-0651.2
CP002185:2889656:2909880290988029110011122Escherichia coli W, complete genomefused chorismate mutase T/prephenate dehydrogenase5e-0650.1
NC_012440:197728:2017252017252028101086Persephonella marina EX-H1, complete genomechorismate mutase/prephenate dehydratase6e-0649.7
CU928160:2785792:2806014280601428071351122Escherichia coli IAI1 chromosome, complete genomefused chorismate mutase T ; prephenate dehydrogenase7e-0649.3