Pre_GI: BLASTP Hits

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Query: NC_010322:4623867:4623867 Pseudomonas putida GB-1 chromosome, complete genome

Start: 4623867, End: 4625504, Length: 1638

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:4124335:4148667414866741503041638Pseudomonas putida ND6 chromosome, complete genomemalate:quinone oxidoreductase01062
NC_020209:945000:9588319588319604771647Pseudomonas poae RE*1-1-14, complete genomemalate:quinone oxidoreductase0880
NC_014323:4792048:4832515483251548341641650Herbaspirillum seropedicae SmR1 chromosome, complete genomemalate:quinone oxidoreductase0833
NC_014838:175939:1914411914411930931653Pantoea sp. At-9b plasmid pPAT9B01, complete sequencemalate/quinone oxidoreductase0701
NC_010694:1932126:1940091194009119417461656Erwinia tasmaniensis, complete genomeMalate:quinone oxidoreductase0685
NC_020064:1501441:1503915150391515055011587Serratia marcescens FGI94, complete genomemalate:quinone-oxidoreductase0684
NC_013421:1545386:1558216155821615597991584Pectobacterium wasabiae WPP163, complete genomemalate/quinone oxidoreductase0675
NC_012917:3198000:3199624319962432012071584Pectobacterium carotovorum subsp. carotovorum PC1, complete genomemalate/quinone oxidoreductase0671
NC_012214:124337:1422411422411438031563Erwinia pyrifoliae Ep1/96, complete genomeMalate:quinone oxidoreductase0654
NC_014618:1593360:1598641159864116002811641Enterobacter cloacae SCF1 chromosome, complete genomemalate/quinone oxidoreductase0653
NC_007974:785216:7874947874947892091716Ralstonia metallidurans CH34 chromosome 2, complete sequenceTwin-arginine translocation pathway signal1e-179630
NC_015410:3701000:3718781371878137203881608Pseudomonas mendocina NK-01 chromosome, complete genomemalate:quinone oxidoreductase1e-179629
NC_009439:3394174:3417570341757034192551686Pseudomonas mendocina ymp, complete genomemalate:quinone oxidoreductase1e-177623
NC_015856:2488297:2511590251159025133081719Collimonas fungivorans Ter331 chromosome, complete genomemalate:quinone oxidoreductase7e-176617
NC_007712:2978000:2996625299662529982441620Sodalis glossinidius str. 'morsitans', complete genomemalate:quinone oxidoreductase2e-167589
NC_017387:1110412:1115341111534111169811641Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomemalate:quinone oxidoreductase2e-153542
NC_016893:694587:7072997072997088611563Wigglesworthia glossinidia endosymbiont of Glossina morsitansmalate dehydrogenase2e-153542
NC_004344:672550:6859546859546874861533Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,malate:quinone oxidoreductase5e-151535
NC_020075:637420:6543216543216558681548Candidatus Blochmannia chromaiodes str. 640, complete genomeputative malate:quinone oxidoreductase1e-144513
NC_007292:623765:6546446546446562031560Candidatus Blochmannia pennsylvanicus str. BPEN, complete genomemalate:quinone oxidoreductase1e-143510
NC_013730:3208571:3240353324035332418851533Spirosoma linguale DSM 74, complete genomemalate/quinone oxidoreductase2e-141502
NC_016609:2224212:2236836223683622383351500Niastella koreensis GR20-10 chromosome, complete genomemalate:quinone oxidoreductase5e-140498
NC_015634:3017564:3022193302219330236951503Bacillus coagulans 2-6 chromosome, complete genomemalate/quinone oxidoreductase2e-139496
NC_012968:1108687:1136384113638411378651482Methylotenera mobilis JLW8, complete genomemalate/quinone oxidoreductase5e-138491
NC_017512:52228:7269072690741561467Neisseria meningitidis WUE 2594, complete genomemalate:quinone oxidoreductase (malate dehydrogenase [acceptor]; MQO)3e-137489
NC_003116:291661:3121243121243135901467Neisseria meningitidis Z2491, complete genomemalate:quinone oxidoreductase3e-137489
NC_013016:44188:6486964869663351467Neisseria meningitidis alpha14 chromosome, complete genomemalate:quinone oxidoreductase7e-137488
NC_016023:1419217:1437568143756814390701503Bacillus coagulans 36D1 chromosome, complete genomemalate/quinone oxidoreductase3e-137488
NC_017505:2192284:2192284219228421937501467Neisseria meningitidis alpha710 chromosome, complete genomemalate:quinone oxidoreductase9e-137487
NC_011035:1876555:1876555187655518780211467Neisseria gonorrhoeae NCCP11945 chromosome, complete genomemalate:quinone oxidoreductase1e-136486
NC_002946:1935186:1955233195523319566991467Neisseria gonorrhoeae FA 1090, complete genomemalate:quinone oxidoreductase1e-136486
NC_003112:2215184:2215184221518422166501467Neisseria meningitidis MC58, complete genomemalate:quinone oxidoreductase4e-136485
NC_017501:2219803:2219803221980322212691467Neisseria meningitidis 8013, complete genomemalate:quinone oxidoreductase (malate dehydrogenase [acceptor]; MQO)4e-136485
NC_017514:2165166:2165166216516621666321467Neisseria meningitidis M01-240149 chromosome, complete genomemalate dehydrogenase4e-136485
NC_017516:2183708:2183708218370821851741467Neisseria meningitidis H44/76 chromosome, complete genomemalate dehydrogenase4e-136485
NC_017518:2190607:2190607219060721920731467Neisseria meningitidis NZ-05/33 chromosome, complete genomemalate dehydrogenase4e-136485
NC_014752:197000:2232592232592247251467Neisseria lactamica ST-640, complete genomemalate:quinone oxidoreductase5e-136484
NC_010120:2098000:2098000209800020994661467Neisseria meningitidis 053442, complete genomemalate:quinone oxidoreductase5e-136484
NC_017138:2293576:2314505231450523160221518Bacillus megaterium WSH-002 chromosome, complete genomeMalate dehydrogenase (Acceptor)5e-136484
NC_008767:2126854:2126854212685421283201467Neisseria meningitidis FAM18, complete genomeprobable malate:quinone oxidoreductase1e-135483
NC_017513:2134308:2134308213430821357741467Neisseria meningitidis G2136 chromosome, complete genomemalate dehydrogenase1e-135483
NC_017511:1783000:1783147178314717845861440Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomemalate:quinone oxidoreductase1e-134480
NC_014733:2851984:99259925114361512Methylovorus sp. MP688 chromosome, complete genomemalate/quinone oxidoreductase6e-133474
NC_016781:1408235:1412282141228214137811500Corynebacterium pseudotuberculosis 3/99-5 chromosome, completemalate:quinone oxidoreductase5e-130464
NC_014329:1407880:1412462141246214139611500Corynebacterium pseudotuberculosis FRC41 chromosome, completemalate:quinone oxidoreductase5e-130464
NC_009482:485238:4852384852384866711434Synechococcus sp. RCC307 chromosome, complete genomemalate:quinone oxidoreductase2e-127456
NC_014909:589677:6018586018586034051548Candidatus Blochmannia vafer str. BVAF chromosome, complete genomemalate dehydrogenase4e-127455
NC_007168:454000:4637854637854652781494Staphylococcus haemolyticus JCSC1435, complete genomemalate:quinone oxidoreductase2e-126453
NC_004461:245768:2657042657042672001497Staphylococcus epidermidis ATCC 12228, complete genomemalate:quinone oxidoreductase5e-122438
NC_005071:265520:2873502873502888401491Prochlorococcus marinus str. MIT 9313, complete genomemalate:quinone oxidoreductase1e-120434
NC_008820:1818695:1857664185766418591541491Prochlorococcus marinus str. MIT 9303, complete genomeputative malate/quinone oxidoreductase2e-120433
NC_016906:1565868:1583842158384215853441503Gordonia polyisoprenivorans VH2 chromosome, complete genomemalate:quinone oxidoreductase Mqo7e-111401
NC_014838:175939:180618180618181103486Pantoea sp. At-9b plasmid pPAT9B01, complete sequence3e-45183
NC_009715:399159:3991593991594005141356Campylobacter curvus 525.92 chromosome, complete genomemalate:quinone oxidoreductase2e-1068.2