Pre_GI: BLASTP Hits

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Query: NC_010322:1520973:1555924 Pseudomonas putida GB-1 chromosome, complete genome

Start: 1555924, End: 1562262, Length: 6339

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013960:379461:3794613794613845155055Nitrosococcus halophilus Nc4 chromosome, complete genomemethyltransferase FkbM family01362
NC_007530:5006319:5006319500631950088832565Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein2e-94349
NC_003997:5006193:5006193500619350087572565Bacillus anthracis str. Ames, complete genomehypothetical protein2e-94349
NC_012659:5006219:5006219500621950087862568Bacillus anthracis str. A0248, complete genomehypothetical protein2e-94348
NC_012581:5008749:5008749500874950113162568Bacillus anthracis str. CDC 684 chromosome, complete genomehypothetical protein2e-94348
NC_016048:3667890:3694882369488236965611680Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein2e-80302
NC_014830:1252249:1256833125683312587251893Intrasporangium calvum DSM 43043 chromosome, complete genomeglycosyl transferase family 22e-69266
NC_010617:1397274:1401039140103914029551917Kocuria rhizophila DC2201, complete genomehypothetical protein2e-65252
NC_013172:3093467:3108786310878631107111926Brachybacterium faecium DSM 4810, complete genomehypothetical protein6e-65251
NC_014550:1581812:1605868160586816076101743Arthrobacter arilaitensis Re117, complete genomeputative glycosyl transferase1e-56223
NC_014830:1252249:1270112127011212740623951Intrasporangium calvum DSM 43043 chromosome, complete genomeglycosyl transferase group 11e-50203
NC_009342:464210:4851134851134887963684Corynebacterium glutamicum R chromosome, complete genomehypothetical protein5e-49198
NC_010336:1282265:128520312852031286198996Francisella philomiragia subsp. philomiragia ATCC 25017, completeputative spore protein4e-41171
NC_016048:3667890:369657636965763697313738Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein1e-40170
NC_015696:798000:800067800067801062996Francisella sp. TX077308 chromosome, complete genomeputative spore protein5e-37158
NC_009714:1404000:1411663141166314128081146Campylobacter hominis ATCC BAA-381, complete genomeputative AcbV5e-29131
NC_010617:1397274:1404926140492614075922667Kocuria rhizophila DC2201, complete genomeputative glycosyltransferase4e-26122
NC_015160:1117371:1124021112402111250431023Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein2e-1173.2
NC_010994:3477000:3482313348231334835961284Rhizobium etli CIAT 652, complete genomeputative glycosyltransferase protein5e-1068.6
NC_014622:4517709:4527043452704345281761134Paenibacillus polymyxa SC2 chromosome, complete genomespore maturation protein4e-0965.5
NC_007759:2315490:232696223269622327960999Syntrophus aciditrophicus SB, complete genomelipopolysaccharide 1,2-N-acetylglucosaminetransferase8e-0964.7
NC_003552:2634828:264018526401852640772588Methanosarcina acetivorans C2A, complete genomehypothetical protein4e-0862.4
NC_008782:2568027:261920526192052619918714Acidovorax sp. JS42, complete genomeubiquinone biosynthesis O-methyltransferase5e-0862
NC_008752:3595516:362265936226593623375717Acidovorax avenae subsp. citrulli AAC00-1, complete genomeubiquinone biosynthesis O-methyltransferase5e-0862
NC_007503:861668:8670158670158695162502Carboxydothermus hydrogenoformans Z-2901, complete genomeglycosyl transferase, group 2 family3e-0759.3
NC_014910:1912552:191615819161581916871714Alicycliphilus denitrificans BC chromosome, complete genomeubiquinone biosynthesis o-methyltransferase9e-0757.8
NC_015422:2078618:208461920846192085332714Alicycliphilus denitrificans K601 chromosome, complete genomeubiquinone biosynthesis O-methyltransferase9e-0757.8
NC_021177:2139838:214090821409082141639732Streptomyces fulvissimus DSM 40593, complete genomeMethyltransferase1e-0657.4
NC_005125:4524868:4537024453702445382261203Gloeobacter violaceus PCC 7421, complete genomehypothetical protein1e-0657.4
NC_008228:3679949:3701279370127937023881110Pseudoalteromonas atlantica T6c, complete genomeMethyltransferase type 111e-0657
NC_000917:270500:2828472828472863753529Archaeoglobus fulgidus DSM 4304, complete genome2e-0656.6
NC_015508:251354:270765270765271625861Agrobacterium sp. H13-3 chromosome linear, complete sequencetype 11 methyltransferase3e-0656.2
NC_007677:771168:806019806019806651633Salinibacter ruber DSM 13855, complete genomemethyltransferase domain protein3e-0656.2
NC_013730:5989387:600832260083226009320999Spirosoma linguale DSM 74, complete genomeMethyltransferase type 118e-0654.7
NC_013716:2476334:247633424763342477062729Citrobacter rodentium ICC168, complete genome3-demethylubiquinone-9 3-methyltransferase8e-0654.7