Pre_GI: BLASTP Hits

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Query: NC_010162:9311465:9316587 Sorangium cellulosum 'So ce 56', complete genome

Start: 9316587, End: 9317582, Length: 996

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003888:4750489:477221547722154773021807Streptomyces coelicolor A3(2), complete genometetR family transcriptional regulatory protein2e-52206
NC_016582:5769080:577043057704305771146717Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator2e-35149
NC_013947:1537275:154742115474211548170750Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family9e-34144
NC_015671:3093596:309531530953153096085771Cellvibrio gilvus ATCC 13127 chromosome, complete genomeregulatory protein TetR3e-29129
NC_013947:1696671:172178617217861722718933Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family2e-28126
NC_015953:2603526:261081926108192611727909Streptomyces sp. SirexAA-E chromosome, complete genomeGntR family transcriptional regulator3e-28125
NC_013595:3541012:355596035559603556841882Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, GntR family6e-27121
NC_016109:327826:332145332145332954810Kitasatospora setae KM-6054, complete genomeputative TetR family transcriptional regulator2e-23110
NC_014210:4122514:412595441259544126646693Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, TetR family3e-21102
NC_013929:5850599:586537458653745866114741Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator4e-1995.9
NC_013947:1537275:155405415540541554905852Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family1e-1894.4
NC_013757:21245:245362453625210675Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, TetR family2e-1376.6
NC_019673:8161242:816215981621598162875717Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, TetR family3e-1376.3
NC_014221:1518583:152696715269671527650684Truepera radiovictrix DSM 17093 chromosome, complete genometranscriptional regulator, TetR family3e-1273.2
NC_013595:41245:412454124541949705Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family3e-1272.8
NC_014391:1317957:132412413241241324828705Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeregulatory protein TetR1e-1170.9
NC_015434:2683631:270247427024742703091618Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator4e-1168.9
NC_003155:622993:634378634378635061684Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator1e-1067.4
NC_008595:5168941:520266052026605203292633Mycobacterium avium 104, complete genometranscriptional regulator, TetR family protein2e-1066.6
NC_016111:986936:100046210004621001124663Streptomyces cattleya NRRL 8057, complete genomeTetR-family transcriptional regulator3e-0756.2
NC_013757:3717500:373045537304553731231777Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, TetR family4e-0755.8
NC_008596:3404832:340867134086713409429759Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, TetR family protein3e-0653.1
NC_002944:99000:104739104739105512774Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein3e-0652.8