Pre_GI: BLASTP Hits

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Query: NC_010117:700112:704835 Coxiella burnetii RSA 331, complete genome

Start: 704835, End: 705488, Length: 654

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: This strain (RSA 331; Hentzerling) is associated with acute Q fever and was isolated from the blood of an infected patient in northern Italy in 1945. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002971:619355:624078624078624731654Coxiella burnetii RSA 493, complete genomehypothetical protein8e-113405
NC_011527:1255998:128622912862291286882654Coxiella burnetii CbuG_Q212, complete genomemethyltransferase8e-113405
NC_009727:670616:672827672827673480654Coxiella burnetii Dugway 7E9-12, complete genomeputative methyltransferase3e-112404
NC_007626:68925:771857718577847663Magnetospirillum magneticum AMB-1, complete genomeSAM-dependent methyltransferase3e-34145
NC_007205:499808:520922520922521581660Candidatus Pelagibacter ubique HTCC1062, complete genomeProtein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) family9e-31133
NC_014844:2158318:217225321722532172912660Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometype 11 methyltransferase2e-25115
NC_013960:3379515:340458934045893405260672Nitrosococcus halophilus Nc4 chromosome, complete genomeMethyltransferase type 116e-1064.3
NC_017904:3113000:312282331228233123479657Mycobacterium sp. MOTT36Y chromosome, complete genomemethyltransferase6e-0961.2
NC_008942:1706191:172229617222961723159864Methanocorpusculum labreanum Z, complete genomehypothetical protein9e-0960.5
NC_008752:1025980:1042601104260110440641464Acidovorax avenae subsp. citrulli AAC00-1, complete genomeMethyltransferase type 115e-0857.8
NC_021177:2139838:214090821409082141639732Streptomyces fulvissimus DSM 40593, complete genomeMethyltransferase6e-0857.4
NC_015578:2026741:205978020597802060406627Treponema primitia ZAS-2 chromosome, complete genomeSAM-dependent methyltransferase, UbiE family7e-0857.4
NC_018681:5490963:551724555172455517922678Nocardia brasiliensis ATCC 700358 chromosome, complete genomemethyltransferase1e-0756.6
NC_003901:860242:880280880280881011732Methanosarcina mazei Go1, complete genomeSAM-dependent methyltransferase1e-0756.6
NC_020389:714178:728673728673729647975Methanosarcina mazei Tuc01, complete genomehypothetical protein1e-0756.2
NC_011206:863987:867346867346867996651Acidithiobacillus ferrooxidans ATCC 53993, complete genomeMethyltransferase type 112e-0756.2
NC_003552:4782635:480040848004084801163756Methanosarcina acetivorans C2A, complete genomeubiE/COQ5 methyltransferase2e-0755.5
NC_014507:982000:996883996883997602720Methanoplanus petrolearius DSM 11571 chromosome, complete genometype 11 methyltransferase3e-0755.5
NC_010676:3009980:3021807302180730242392433Burkholderia phytofirmans PsJN chromosome 2, complete sequenceMethyltransferase type 113e-0755.5
NC_008702:3928043:3945793394579339482882496Azoarcus sp. BH72, complete genomeHypothetical protein predicted by Glimmer/Critica3e-0755.1
NC_013093:3791912:380528438052843806099816Actinosynnema mirum DSM 43827, complete genomeMethyltransferase type 113e-0755.1
NC_009637:1421885:142430414243041425161858Methanococcus maripaludis C7 chromosome, complete genometype 11 methyltransferase5e-0754.3
NC_007604:1442500:145991414599141460555642Synechococcus elongatus PCC 7942, complete genomemembrane-associated protein6e-0754.3
NC_014976:759129:786258786258786809552Bacillus subtilis BSn5 chromosome, complete genomeputative methyltransferase1e-0653.1
NC_013790:2131000:213142521314252132093669Methanobrevibacter ruminantium M1 chromosome, complete genomeSAM-dependent methyltransferase5e-0651.2