Pre_GI: BLASTP Hits

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Query: NC_010102:283364:295402 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 295402, End: 295857, Length: 456

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:2703013:271138027113802711835456Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-83307
NC_004631:283289:293014293014293469456Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-83307
NC_006905:2805877:281300328130032813458456Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein1e-82305
NC_011080:2789744:279811127981112798566456Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein1e-82305
NC_011149:2701916:270904027090402709495456Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein3e-82303
NC_010694:1932126:194220319422031942652450Erwinia tasmaniensis, complete genomehypothetical protein4e-47186
NC_014958:3207431:322925732292573229772516Deinococcus maricopensis DSM 21211 chromosome, complete genomehypothetical protein1e-39161
NC_015161:758929:774830774830775366537Deinococcus proteolyticus MRP chromosome, complete genomehypothetical protein2e-35147
NC_001263:2236777:225859022585902259060471Deinococcus radiodurans R1 chromosome 1, complete sequencehypothetical protein4e-33140
NC_013037:1072266:107579410757941076291498Dyadobacter fermentans DSM 18053, complete genomehypothetical protein1e-30132