Pre_GI: BLASTP Hits

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Query: NC_010067:892729:914941 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 914941, End: 915159, Length: 219

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:1138441:115119811511981151500303Citrobacter rodentium ICC168, complete genome1e-1891.7
NC_007712:2028500:2057823205782320588451023Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase1e-1788.6
NC_011205:2180598:218594621859462186935990Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853integrase protein5e-1786.7
NC_011294:2053991:205795920579592058948990Salmonella enterica subsp. enterica serovar Enteritidis strphage integrase5e-1786.3
NC_020181:2097066:2117522211752221185741053Enterobacter aerogenes EA1509E, complete genomePutative integrase4e-1683.2
NC_010159:2128157:214251321425132142737225Yersinia pestis Angola, complete genome4e-0857
NC_017168:3535786:354532035453203545544225Yersinia pestis A1122 chromosome, complete genomephage integrase family site specific recombinase4e-0857
NC_017265:2306500:232127223212722321541270Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein3e-0857
NC_010634:2124185:213599021359902136214225Yersinia pseudotuberculosis PB1/+, complete genomephage integrase family site specific recombinase6e-0856.2
NC_009708:2537557:2555953255595325569691017Yersinia pseudotuberculosis IP 31758 chromosome, complete genomephage integrase family site specific recombinase1e-0755.1
NC_012779:2127542:2148941214894121499511011Edwardsiella ictaluri 93-146, complete genomesite-specific recombinase, phage integrase family3e-0753.9
NC_007712:1954808:1974024197402419750401017Sodalis glossinidius str. 'morsitans', complete genomephage integrase5e-0753.1
NC_006155:2116834:2128303212830321293251023Yersinia pseudotuberculosis IP 32953, complete genomeputative integrase7e-0752.8
NC_014837:1570500:157833915783391578668330Pantoea sp. At-9b chromosome, complete genome5e-0649.7