Pre_GI: BLASTP Hits

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Query: NC_010067:84093:112209 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 112209, End: 112481, Length: 273

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009801:3013838:301505530150553015327273Escherichia coli E24377A, complete genomehydrogenase assembly chaperone HypC/HupF2e-45180
NC_008253:2828573:282943628294362829708273Escherichia coli 536, complete genomehydrogenase isoenzymes formation protein HypC2e-45180
NC_011740:2986514:300153230015323001780249Escherichia fergusonii ATCC 35469, complete genomehydrogenase 2 accessory protein3e-1787
NC_009937:673820:676251676251676550300Azorhizobium caulinodans ORS 571, complete genomehydrogenase expression/formation protein2e-1271.2
NC_009720:2424975:244490824449082445207300Xanthobacter autotrophicus Py2, complete genomehydrogenase assembly chaperone hypC/hupF2e-1168.2
NC_007413:5742406:575924257592425759502261Anabaena variabilis ATCC 29413, complete genomeHydrogenase expression/formation protein (HUPF/HYPC)3e-1167
NC_003272:784437:803006803006803254249Nostoc sp. PCC 7120, complete genomehydrogenase expression/formation protein7e-1165.9
NC_020411:28995:459084590846147240Hydrogenobaculum sp. HO, complete genomeHydrogenase maturation protein HypC1e-0858.2
NC_015557:30622:458744587446113240Hydrogenobaculum sp. 3684 chromosome, complete genomehydrogenase assembly chaperone hypC/hupF1e-0858.2
NC_015587:28997:459104591046149240Hydrogenobaculum sp. SHO chromosome, complete genomehydrogenase assembly chaperone hypC/hupF1e-0858.2
NC_017192:1841987:185479118547911855072282Arcobacter sp. L, complete genomehydrogenase expression/formation protein HypC3e-0857.4
NC_007575:1484305:149430414943041494594291Sulfurimonas denitrificans DSM 1251, complete genomehydrogenase expression/formation protein (HUPF/HYPC)5e-0856.6
NC_015565:348941:369869369869370093225Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehydrogenase assembly chaperone hypC/hupF1e-0755.5
NC_011898:513835:532624532624532848225Clostridium cellulolyticum H10, complete genomehydrogenase assembly chaperone hypC/hupF1e-0755.1
NC_019942:987134:104940910494091049648240Aciduliprofundum sp. MAR08-339, complete genomehydrogenase assembly chaperone HypC/HupF4e-0753.5
NC_012483:3529895:354117035411703541436267Acidobacterium capsulatum ATCC 51196, complete genomehydrogenase assembly chaperone HypC/HupF6e-0753.1
NC_003901:2533000:256717225671722567432261Methanosarcina mazei Go1, complete genomehydrogenase expression/formation protein6e-0752.8
NC_021182:1761789:177547617754761775700225Clostridium pasteurianum BC1, complete genomehydrogenase assembly chaperone HypC/HupF9e-0752.4
NC_010794:1673049:167419916741991674489291Methylacidiphilum infernorum V4, complete genome[NiFe] hydrogenase metallocenter assembly protein HypC9e-0752.4
NC_021182:1983456:199682419968241997048225Clostridium pasteurianum BC1, complete genomehydrogenase assembly chaperone HypC/HupF9e-0752.4
NC_007626:1746475:177918117791811779417237Magnetospirillum magneticum AMB-1, complete genomeHydrogenase maturation factor2e-0651.6
NC_013222:229190:249990249990250247258Robiginitalea biformata HTCC2501, complete genomehydrogenase expression/formation protein; HypC2e-0651.6
NC_017273:352150:372604372604372873270Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completehydrogenase assembly chaperone HypC/HupF3e-0650.4
NC_010336:852915:864108864108864323216Francisella philomiragia subsp. philomiragia ATCC 25017, completehydrogenase expression/formation protein (HUPF/HYPC)4e-0650.1
NC_013921:1614397:162049616204961620738243Thermoanaerobacter italicus Ab9 chromosome, complete genomehydrogenase assembly chaperone hypC/hupF7e-0649.3
NC_014209:1580423:158647015864701586712243Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,hydrogenase assembly chaperone hypC/hupF8e-0649.3