Pre_GI: BLASTP Hits

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Query: NC_010067:4149298:4165950 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 4165950, End: 4166246, Length: 297

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007712:254000:267652267652267948297Sodalis glossinidius str. 'morsitans', complete genomeDNA-binding protein Fis3e-50196
NC_011753:3088952:310723831072383107534297Vibrio splendidus LGP32 chromosome 1, complete genomeputative factor-for-inversion stimulation protein6e-43172
NC_011312:3060371:307844930784493078745297Aliivibrio salmonicida LFI1238 chromosome chromosome 1, completeDNA-binding protein Fis7e-42169
NC_014541:475350:498391498391498699309Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, Fis family3e-29126
NC_015554:4724245:474876147487614749054294Alteromonas sp. SN2 chromosome, complete genomeFactor for inversion stimulation Fis, transcriptional activator3e-27120
NC_013851:949973:955417955417955725309Allochromatium vinosum DSM 180 chromosome, complete genometranscriptional regulator, Fis family6e-1579.7
NC_003116:1518110:153846015384601538699240Neisseria meningitidis Z2491, complete genomefactor-for-inversion-stimulation protein3e-1373.9
NC_008767:1321129:134442013444201344659240Neisseria meningitidis FAM18, complete genomefactor-for-inversion-stimulation protein3e-1373.9
NC_013016:1289975:131134413113441311583240Neisseria meningitidis alpha14 chromosome, complete genomeDNA-binding protein Fis3e-1373.9
NC_017505:1370128:139563313956331395872240Neisseria meningitidis alpha710 chromosome, complete genomefactor-for-inversion-stimulation protein3e-1373.9
NC_017512:1294970:131550313155031315742240Neisseria meningitidis WUE 2594, complete genomeputative Fis-like DNA-binding protein3e-1373.9
NC_017513:1331623:135953313595331359772240Neisseria meningitidis G2136 chromosome, complete genomeFis family transcriptional regulator3e-1373.9
NC_017518:1449923:147386014738601474099240Neisseria meningitidis NZ-05/33 chromosome, complete genomeFis family transcriptional regulator3e-1373.9
NC_007614:109000:137575137575137817243Nitrosospira multiformis ATCC 25196 chromosome 1, completetranscriptional regulator, Fis family8e-1372.4