Pre_GI: BLASTP Hits

Some Help

Query: NC_010067:4149298:4163201 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 4163201, End: 4163884, Length: 684

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006511:3364448:336655033665503367212663Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtranscriptional repressor for envCD (acrEF) (TetR/AcrR family)2e-119427
NC_015566:1127595:116103711610371161717681Serratia sp. AS12 chromosome, complete genomeTetR family transcriptional regulator6e-39160
NC_015567:1127780:116122211612221161902681Serratia sp. AS9 chromosome, complete genomeTetR family transcriptional regulator6e-39160
NC_016002:2453919:247109424710942471732639Pseudogulbenkiania sp. NH8B, complete genomeTetR family transcriptional regulator2e-28125
NC_008570:3220539:327467032746703275311642Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeTetR family regulatory protein1e-24113
NC_015424:3112637:315280931528093153447639Aeromonas veronii B565 chromosome, complete genomeTetR family transcriptional regulator3e-23108
NC_008752:415599:420283420283420975693Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, TetR family3e-1995.5
NC_014910:465980:472096472096472716621Alicycliphilus denitrificans BC chromosome, complete genomeregulatory protein tetr5e-1891.3
NC_009439:918534:937355937355937975621Pseudomonas mendocina ymp, complete genomeTetR family transcriptional regulator8e-1787.4
NC_010002:528529:533152533152533817666Delftia acidovorans SPH-1, complete genometranscriptional regulator, TetR family5e-1477.8
NC_007947:1703326:170922317092231709855633Methylobacillus flagellatus KT, complete genometranscriptional regulator, TetR family8e-1477.4
NC_013665:2132000:213526921352692135904636Methanocella paludicola SANAE, complete genomeTetR family transcriptional regulator8e-1373.9
NC_007953:572926:596866596866597480615Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, TetR family1e-1169.7
NC_010170:4409683:442852144285214429150630Bordetella petrii, complete genomePutative HTH-type transcriptional regulator, AcrR-family6e-0857.8
NC_021182:3771523:377585437758543776483630Clostridium pasteurianum BC1, complete genometranscriptional regulator1e-0653.1
NC_008563:4707826:472109047210904721461372Escherichia coli APEC O1, complete genomeputative transcriptional repressor2e-0652.4
NC_006361:498305:504157504157504795639Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator3e-0652
NC_014376:1586649:158664915866491587239591Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional regulator, TetR family4e-0651.6
NC_016906:3286384:3287341328734132885641224Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative TetR family transcriptional regulator5e-0651.2
NC_015589:3340500:335968733596873360313627Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeregulatory protein TetR6e-0651.2