Pre_GI: BLASTP Hits

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Query: NC_010001:3614314:3621795 Clostridium phytofermentans ISDg, complete genome

Start: 3621795, End: 3622733, Length: 939

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013315:1707293:171639617163961717085690Clostridium difficile CD196 chromosome, complete genomephage cell wall hydrolase9e-33140
NC_020291:795500:851136851136851813678Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeLysM domain-containing protein5e-24111
NC_013517:1501276:151307915130791513726648Sebaldella termitidis ATCC 33386, complete genomehypothetical protein6e-24111
NC_015913:117966:146892146892147593702Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomehypothetical protein1e-23110
NC_013406:6052913:605565560556556056374720Paenibacillus sp. Y412MC10 chromosome, complete genomepeptidoglycan-binding lysin domain-containing protein3e-23109
NC_017297:2531750:253784125378412538518678Clostridium botulinum F str. 230613 chromosome, complete genomelysM domain protein5e-23108
NC_010723:915697:926873926873927535663Clostridium botulinum E3 str. Alaska E43, complete genomepeptidoglycan-binding LysM3e-21102
NC_011830:1504497:152165615216561522327672Desulfitobacterium hafniense DCB-2, complete genomePeptidoglycan-binding LysM4e-1685.9
NC_015737:143428:158238158238159068831Clostridium sp. SY8519, complete genomehypothetical protein6e-1581.6
NC_018515:3411276:342770634277063428368663Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeLysM domain-containing protein1e-1377.4
NC_009848:2755874:276134227613422762010669Bacillus pumilus SAFR-032, complete genomehypothetical protein5e-1272
NC_016047:261304:266639266639267298660Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeLysM domain-containing protein1e-1171.2
NC_014376:1472304:150433215043321504994663Clostridium saccharolyticum WM1 chromosome, complete genomePeptidoglycan-binding lysin domain protein1e-1170.9
NC_009012:2953638:295937729593772960036660Clostridium thermocellum ATCC 27405, complete genomePeptidoglycan-binding LysM1e-1170.5
NC_016048:2563222:258043225804322581085654Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein3e-1169.3
NC_000964:2670288:267128126712812671940660Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein7e-1168.2
NC_014976:627935:656870656870657529660Bacillus subtilis BSn5 chromosome, complete genomehypothetical protein7e-1168.2
NC_020134:420500:445303445303446001699Clostridium stercorarium subsp. stercorarium DSM 8532, completepeptidoglycan-binding lysin domain-containing protein8e-1168.2
NC_017195:1308730:131587613158761316487612Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeLysM domain protein8e-1064.7
NC_014976:3546884:355283535528353553494660Bacillus subtilis BSn5 chromosome, complete genomeputative PBSX prophage murein binding protein1e-0964.3
NC_000964:1330000:133822213382221338929708Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-0964.3
NC_020244:1335531:134209013420901342749660Bacillus subtilis XF-1, complete genomehypothetical protein2e-0963.5
UCMB5137:861734:875509875509876168660Bacillus atrophaeus UCMB-5137hypothetical protein7e-0961.6
NC_016047:1435961:144521114452111445870660Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeLysM domain-containing protein1e-0860.8
NC_014479:1291500:129713212971321297791660Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative murein binding protein; PBSZ phage2e-0860.1
NC_019896:2719456:273037327303732731065693Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completePhage-like element PBSX protein XkdP2e-0756.6
NC_014652:801653:825871825871826527657Caldicellulosiruptor hydrothermalis 108 chromosome, completepeptidoglycan-binding lysin domain protein5e-0755.5
NC_012778:2015409:2034528203452820357061179Eubacterium eligens ATCC 27750, complete genomehypothetical protein2e-0653.5
NC_016641:2950000:295805629580562958697642Paenibacillus terrae HPL-003 chromosome, complete genomepeptidoglycan-binding lysin6e-0651.6