Pre_GI: BLASTP Hits

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Query: NC_009837:92000:109015 Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequence

Start: 109015, End: 109878, Length: 864

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. Avian pathogenic Escherichia coli strain isolated from the lung of a chicken clinically diagnosed with colisepticemia. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004431:1166568:116782311678231168386564Escherichia coli CFT073, complete genomehypothetical protein5e-78291
NC_003277:22257:407784077841364587Salmonella typhimurium LT2 plasmid pSLT, complete sequence5e-49194
NC_006155:2208686:221214522121452212798654Yersinia pseudotuberculosis IP 32953, complete genomesimilar to Orf81 bacteriophage 1869e-30130
NC_010634:2124185:212841221284122129065654Yersinia pseudotuberculosis PB1/+, complete genomeexonuclease RNase T and DNA polymerase III3e-29129
NC_011147:2676972:268684526868452687429585Salmonella enterica subsp. enterica serovar Paratyphi A strexonuclease1e-28127
NC_006511:2677964:269130926913092691893585Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative exonuclease1e-28127
NC_003198:4453457:450308645030864503670585Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative exonuclease1e-28127
NC_016845:4046142:405387740538774054458582Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative exonuclease CP816e-27121
NC_020260:312805:321527321527322111585Cronobacter sakazakii Sp291, complete genomeputative exonuclease CP816e-27121
NC_011667:1:469146915296606Thauera sp. MZ1T plasmid pTha01, complete sequenceExonuclease RNase T and DNA polymerase III6e-26118
NC_017506:2089769:210113921011392101711573Marinobacter adhaerens HP15 chromosome, complete genomeexonuclease RNase T and DNA polymerase III5e-21101
NC_007645:6858465:687346568734656874034570Hahella chejuensis KCTC 2396, complete genomeputative exonuclease5e-21101
NC_013508:3188978:322647132264713227070600Edwardsiella tarda EIB202, complete genomeOrf81 bacteriophage 1867e-1994.4
NC_019757:5852000:586552858655285866355828Cylindrospermum stagnale PCC 7417, complete genomeDNA polymerase III epsilon subunit-like 3'-5' exonuclease1e-1790.5
NC_015389:2101841:2105296210529621082292934Coriobacterium glomerans PW2 chromosome, complete genomeDNA polymerase III, epsilon subunit3e-0755.8
NC_017167:1648913:178021217802121781027816Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA polymerase III subunit epsilon8e-0754.7
NC_007802:179780:185734185734186429696Jannaschia sp. CCS1, complete genomeDNA polymerase III, epsilon subunit1e-0653.9
NC_012471:781063:7810637810637835342472Streptococcus equi subsp. equi 4047, complete genomeATP-dependent DNA helicase7e-0651.6