Pre_GI: BLASTP Hits

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Query: NC_009800:2651730:2653015 Escherichia coli HS, complete genome

Start: 2653015, End: 2657112, Length: 4098

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003902:3666544:3718121371812137220413921Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein01845
NC_007086:1224867:1237479123747912413993921Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein01845
NC_016026:2170500:2175785217578521792163432Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeputative addiction module0978
NC_009648:4497749:4508776450877645125373762Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein1e-139498
NC_013216:1442044:1464523146452314682513729Desulfotomaculum acetoxidans DSM 771, complete genomeXRE family transcriptional regulator5e-123443
NC_020829:940692:9534349534349573363903Pseudomonas denitrificans ATCC 13867, complete genomeXRE family transcriptional regulator4e-115417
NC_007761:2071500:2081423208142320851393717Rhizobium etli CFN 42, complete genomehypothetical protein2e-112408
NC_009445:6621996:6650381665038166544394059Bradyrhizobium sp. ORS 278 chromosome, complete genomehypothetical protein2e-112407
NC_009485:3461051:3465586346558634696444059Bradyrhizobium sp. BTAi1 chromosome, complete genomeXRE family transcriptional regulator2e-109398
NC_011748:2973968:2980678298067829844243747Escherichia coli 55989, complete genomehypothetical protein2e-104381
CU928145:2973968:2980678298067829844243747Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein2e-104381
NC_010681:4299979:4306221430622143099763756Burkholderia phytofirmans PsJN chromosome 1, complete sequencehypothetical protein2e-99364
NC_017322:1360764:1368982136898213727343753Sinorhizobium meliloti BL225C chromosome, complete genomehypothetical protein2e-97357
NC_007510:3340008:3347558334755833516104053Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, XRE family1e-93345
NC_009523:341347:3514613514613552763816Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein2e-91338
NC_015145:3657103:3683146368314636869283783Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomehypothetical protein9e-88326
NC_013510:2937530:2955518295551829593003783Thermomonospora curvata DSM 43183, complete genomehypothetical protein1e-87325
NC_007974:2097334:2163928216392821679684041Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, XRE family8e-85316
NC_014500:1066911:1081001108100110840603060Dickeya dadantii 3937 chromosome, complete genomehypothetical protein2e-81305
NC_015437:164194:1692151692151730303816Selenomonas sputigena ATCC 35185 chromosome, complete genomehypothetical protein2e-79298
NC_014540:2933853:2949950294995029537773828Burkholderia sp. CCGE1003 chromosome 2, complete sequencehypothetical protein1e-62242
NC_008942:960306:9792109792109826113402Methanocorpusculum labreanum Z, complete genomehypothetical protein7e-54213
NC_007005:4515853:4538842453884245411032262Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein4e-52207
NC_015578:3914189:3922225392222539253683144Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein3e-45185
NC_014391:1967167:1968463196846319723863924Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein1e-42176
NC_007005:4515853:4541179454117945426031425Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-27125
NC_021066:839734:8507518507518524301680Raoultella ornithinolytica B6, complete genomeXRE family transcriptional regulator3e-23112
NC_011386:136223:169626169626169964339Oligotropha carboxidovorans OM5, complete genomeplasmid maintenance system antidote protein of XRE family1e-1483.2
NC_009937:3748885:375806937580693758392324Azorhizobium caulinodans ORS 571, complete genomeplasmid maintenance system antidote protein7e-1480.9
NC_008686:1960034:196580519658051966104300Paracoccus denitrificans PD1222 chromosome 1, complete sequenceplasmid maintenance system antidote protein, XRE family4e-1275.1
NC_015694:48344:614961496463315Runella slithyformis DSM 19594 plasmid pRUNSL03, complete sequenceplasmid maintenance system antidote protein, XRE family6e-1067.8
NC_013173:2884887:293123329312332931562330Desulfomicrobium baculatum DSM 4028, complete genomeplasmid maintenance system antidote protein, XRE family8e-1067.4
NC_009483:4434375:446194244619424462226285Geobacter uraniireducens Rf4 chromosome, complete genomeXRE family plasmid maintenance system antidote protein1e-0967
NC_019940:203718:210322210322210603282Thioflavicoccus mobilis 8321 chromosome, complete genomeHigA family addiction module antidote protein2e-0965.9
NC_010125:381711:384045384045384332288Gluconacetobacter diazotrophicus PAl 5, complete genomeputative plasmid maintenance system antidote protein5e-0964.7
NC_014722:1467996:147187714718771472230354Burkholderia rhizoxinica HKI 454, complete genomevirulence-associated protein A8e-0963.9
NC_014032:825793:925578925578925895318Salinibacter ruber M8 chromosome, complete genomePlasmid maintenance system antidote protein2e-0862.8
NC_007677:771168:828581828581828898318Salinibacter ruber DSM 13855, complete genomeaddiction module antidote protein, HigA family2e-0862.8
NC_016745:2028424:205189620518962052180285Oceanimonas sp. GK1 chromosome, complete genomeXRE family transcriptional regulator2e-0862.4
NC_004349:3938:191541915419453300Shewanella oneidensis MR-1 plasmid pMR-1, complete sequenceplasmid maintenance system antidote protein HigA4e-0862
NC_008751:1736512:175481817548181755120303Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeplasmid maintenance system antidote protein, XRE family7e-0860.8
NC_019940:2098902:210830321083032108551249Thioflavicoccus mobilis 8321 chromosome, complete genomeHigA family addiction module antidote protein1e-0760.1
NC_014761:2248000:224929522492952249597303Oceanithermus profundus DSM 14977 chromosome, complete genomeplasmid maintenance system antidote protein, xre family1e-0759.7
NC_013889:1159343:117651211765121176784273Thioalkalivibrio sp. K90mix chromosome, complete genomeplasmid maintenance system antidote protein, XRE family2e-0759.3
NC_008358:2808299:282618928261892826482294Hyphomonas neptunium ATCC 15444, complete genomeaddiction module antidote protein, HigA family3e-0758.5
NC_014973:243000:250913250913251218306Geobacter sp. M18 chromosome, complete genomeXRE family plasmid maintenance system antidote protein4e-0758.2
NC_013422:1755875:176959317695931769883291Halothiobacillus neapolitanus c2, complete genomeplasmid maintenance system antidote protein, XRE family1e-0656.6
NC_014643:609544:618849618849619109261Rothia dentocariosa ATCC 17931 chromosome, complete genomeHigA family addiction module antidote protein2e-0655.8
NC_009142:949510:953420953420953719300Saccharopolyspora erythraea NRRL 2338, complete genomeplasmid maintenance system antidote protein4e-0655.1
NC_016629:3789554:382642838264283826736309Desulfovibrio africanus str. Walvis Bay chromosome, completeplasmid maintenance system antidote protein4e-0655.1
NC_007517:3344799:335968033596803359985306Geobacter metallireducens GS-15, complete genomeplasmid maintenance system antidote protein, XRE family3e-0655.1
NC_015410:3209954:321563332156333215920288Pseudomonas mendocina NK-01 chromosome, complete genomeantitoxin protein5e-0654.7
NC_011979:2969969:299132529913252991630306Geobacter sp. FRC-32, complete genomeplasmid maintenance system antidote protein, XRE family6e-0654.3
NC_015673:1794590:181670918167091817008300Corynebacterium resistens DSM 45100 chromosome, complete genomehypothetical protein8e-0653.9
NC_015164:1952500:196961019696101969954345Bacteroides salanitronis DSM 18170 chromosome, complete genomeplasmid maintenance system antidote protein, XRE family9e-0653.9
NC_017505:1013311:101984310198431020154312Neisseria meningitidis alpha710 chromosome, complete genomeHTH-type transcriptional regulator1e-0553.9