Pre_GI: BLASTP Hits

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Query: NC_009800:2083465:2093664 Escherichia coli HS, complete genome

Start: 2093664, End: 2095118, Length: 1455

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012967:1967675:1993060199306019945141455Escherichia coli B str. REL606 chromosome, complete genomeAMP nucleosidase0977
NC_010468:1816359:1851826185182618532801455Escherichia coli ATCC 8739, complete genomeAMP nucleosidase0977
NC_000913:2042935:2053085205308520545391455Escherichia coli K12, complete genomeAMP nucleosidase0977
NC_010473:2119480:2144093214409321455471455Escherichia coli str. K-12 substr. DH10B, complete genomeAMP nucleosidase0977
AC_000091:2027648:2057198205719820586521455Escherichia coli W3110 DNA, complete genomeAMP nucleosidase0977
NC_011745:2209288:2232775223277522342291455Escherichia coli ED1a chromosome, complete genomeAMP nucleosidase0977
NC_012759:1920955:1945568194556819470221455Escherichia coli BW2952 chromosome, complete genomeAMP nucleosidase0977
NC_012947:1769438:1778146177814617796001455Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeAMP nucleosidase0977
NC_011601:2139188:2144306214430621457601455Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeAMP nucleosidase0975
NC_016822:2201388:2236502223650222379561455Shigella sonnei 53G, complete genomeAMP nucleosidase0974
NC_009792:808332:8101268101268115801455Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein0912
NC_011294:2053991:2094719209471920961731455Salmonella enterica subsp. enterica serovar Enteritidis strAMP nucleosidase0889
NC_011274:2044000:2085852208585220873061455Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91AMP nucleosidase0889
NC_011094:2061000:2061677206167720631311455Salmonella enterica subsp. enterica serovar Schwarzengrund strAMP nucleosidase0889
NC_004631:948054:9544359544359558891455Salmonella enterica subsp. enterica serovar Typhi Ty2, completeAMP nucleosidase0888
NC_016832:948029:9543899543899558431455Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,AMP nucleosidase0888
NC_011205:2180598:2221732222173222231861455Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853AMP nucleosidase0887
NC_016831:947281:9472819472819487351455Salmonella enterica subsp. enterica serovar Gallinarum/pullorumAMP nucleosidase0887
NC_010067:892729:8950348950348964881455Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0875
NC_013850:1753716:1778322177832217797761455Klebsiella variicola At-22 chromosome, complete genomeAMP nucleosidase0867
NC_016612:5231065:5238951523895152404051455Klebsiella oxytoca KCTC 1686 chromosome, complete genomeAMP nucleosidase0851
NC_015566:3417951:3420518342051834219781461Serratia sp. AS12 chromosome, complete genomeAMP nucleosidase0819
NC_012214:1650523:1654124165412416555811458Erwinia pyrifoliae Ep1/96, complete genomeAMP nucleosidase0760
NC_017168:3192817:3192817319281731944571641Yersinia pestis A1122 chromosome, complete genomeAMP nucleosidase0694
NC_010322:5349000:5397808539780853992711464Pseudomonas putida GB-1 chromosome, complete genomeAMP nucleosidase1e-147523
NC_003296:262118:2630882630882645691482Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeAMP nucleosidase6e-124444
NC_014722:846084:8486038486038501081506Burkholderia rhizoxinica HKI 454, complete genomeAMP nucleosidase2e-112406
NC_012721:2021885:2038753203875320402761524Burkholderia glumae BGR1 chromosome 2, complete genomeAMP nucleosidase1e-110400
NC_020302:85821:1150211150211164421422Corynebacterium halotolerans YIM 70093 = DSM 44683, completeAMP nucleosidase2e-84313
NC_012590:37697:7009970099715621464Corynebacterium aurimucosum ATCC 700975, complete genomeAMP nucleosidase9e-84311
NC_000117:845141:883419883419884288870Chlamydia trachomatis D/UW-3/CX, complete genomeAMP nucleosidase1e-1792