Pre_GI: BLASTP Hits

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Query: NC_009708:915814:930920 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 930920, End: 931306, Length: 387

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015224:2095816:211006021100602110716657Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative inner membrane protein1e-49194
NC_003197:1945858:197406919740691974728660Salmonella typhimurium LT2, complete genomeputative inner membrane protein2e-30130
NC_011080:1944226:197969319796931980352660Salmonella enterica subsp. enterica serovar Newport str. SL254,inner membrane protein YebE2e-30130
NC_016810:1903426:193163719316371932296660Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-30130
NC_016856:1957263:198547419854741986133660Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein2e-30130
NC_016857:1903426:193163719316371932296660Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein2e-30130
NC_016860:1943203:196961019696101970269660Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-30130
NC_016863:1905454:193366519336651934324660Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein2e-30130
NC_016822:1339058:136144013614401362099660Shigella sonnei 53G, complete genomehypothetical protein1e-29128
NC_007384:1355060:137859213785921379251660Shigella sonnei Ss046, complete genomehypothetical protein1e-29128
NC_008258:1873805:189354118935411894200660Shigella flexneri 5 str. 8401, complete genomehypothetical protein4e-28123
NC_013850:1887556:188755618875561888218663Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF5335e-24109
NC_013421:3117639:312370331237033124356654Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF5331e-22105