Pre_GI: BLASTP Hits

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Query: NC_009664:4696961:4755579 Kineococcus radiotolerans SRS30216, complete genome

Start: 4755579, End: 4757159, Length: 1581

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003888:6853107:6865736686573668673581623Streptomyces coelicolor A3(2), complete genomemalate synthase1e-164580
NC_015588:939037:9646569646569663771722Isoptericola variabilis 225 chromosome, complete genomemalate synthase A8e-154544
NC_015635:4864349:4864349486434948659951647Microlunatus phosphovorus NM-1, complete genomemalate synthase5e-146518
NC_014623:8798820:8815667881566788172861620Stigmatella aurantiaca DW4/3-1 chromosome, complete genomemalate synthase9e-140497
NC_015726:2177783:2198040219804021996261587Cupriavidus necator N-1 chromosome 1, complete sequencemalate synthase AceB3e-139495
NC_017208:1147230:1147230114723011488191590Bacillus thuringiensis serovar chinensis CT-43 chromosome, completemalate synthase6e-135481
NC_011725:1150779:1150779115077911523681590Bacillus cereus B4264 chromosome, complete genomemalate synthase6e-135481
NC_004722:1108649:1108649110864911102111563Bacillus cereus ATCC 14579, complete genomemalate synthase5e-135481
NC_005945:1103729:1104569110456911061581590Bacillus anthracis str. Sterne, complete genomemalate synthase4e-135481
NC_012659:1103737:1104577110457711061661590Bacillus anthracis str. A0248, complete genomemalate synthase4e-135481
NC_011772:1094534:1094534109453410961231590Bacillus cereus G9842, complete genomemalate synthase A4e-135481
NC_014335:1094000:1094042109404210956311590Bacillus cereus biovar anthracis str. CI chromosome, completemalate synthase1e-134480
NC_013282:3962188:3965491396549139671431653Cronobacter turicensis, complete genomeMalate synthase A5e-129461
NC_010506:1893000:1904877190487719062831407Shewanella woodyi ATCC 51908, complete genomeMalate synthase6e-77288
NC_009376:420000:4346124346124370532442Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomemalate synthase8e-22105
NC_016885:1614427:1618232161823216206732442Pyrobaculum oguniense TE7 chromosome, complete genomeMalate synthase3e-21103
NC_003364:756813:7582977582977607382442Pyrobaculum aerophilum str. IM2, complete genomemalate synthase (glcB)4e-21103