Pre_GI: BLASTP Hits

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Query: NC_009664:1569335:1612590 Kineococcus radiotolerans SRS30216, complete genome

Start: 1612590, End: 1613819, Length: 1230

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011886:4336417:4366851436685143680441194Arthrobacter chlorophenolicus A6, complete genomemajor facilitator superfamily MFS_12e-20100
NC_016845:1773416:1776419177641917776211203Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative DEOR-type transcriptional regulator7e-1685.5
NC_016612:3361802:3366927336692733681291203Klebsiella oxytoca KCTC 1686 chromosome, complete genomemajor facilitator superfamily protein1e-1481.3
NC_011083:967260:9878609878609890711212Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,inner membrane protein YbjJ3e-1377
NC_003197:920000:9405939405939418041212Salmonella typhimurium LT2, complete genomeputative transport protein/regulator3e-1377
NC_016856:921057:9416459416459428561212Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transport protein/regulator3e-1377
NC_016860:959609:9801979801979814081212Salmonella enterica subsp. enterica serovar Typhimurium strputative transport protein/regulator3e-1377
NC_016863:920346:9409349409349421451212Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transport protein/regulator3e-1377
NC_011080:924326:9449279449279461381212Salmonella enterica subsp. enterica serovar Newport str. SL254,inner membrane protein YbjJ3e-1376.6
NC_006905:946418:9683409683409695511212Salmonella enterica subsp. enterica serovar Choleraesuis strputative transport protein/putative regulatorn3e-1376.6
NC_012125:894955:9155419155419167521212Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-1376.6
NC_011094:973140:9937239937239949341212Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-1376.6
NC_012947:2898179:2911127291112729123351209Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completemajor facilitator superfamily MFS_13e-1376.6
NC_016810:919266:9398549398549410651212Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-1376.6
NC_016857:919266:9398549398549410651212Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transport protein/regulator3e-1376.6
NC_017046:919249:9398369398369410471212Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein3e-1376.6
NC_011294:878896:8994858994859006961212Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein4e-1376.3
NC_011205:944125:9647299647299659401212Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-1376.3
NC_011601:846358:8505138505138517211209Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransporter8e-1375.1
NC_011274:896802:9173929173929186031212Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-1170.9
NC_013174:601434:6125276125276138581332Jonesia denitrificans DSM 20603, complete genomemajor facilitator superfamily MFS_17e-1065.5
NC_008752:725189:762900762900763748849Acidovorax avenae subsp. citrulli AAC00-1, complete genomeintegral membrane protein7e-0962
NC_013174:601434:6138556138556151321278Jonesia denitrificans DSM 20603, complete genomemajor facilitator superfamily MFS_11e-0758.2
NC_014550:2091797:2126004212600421272211218Arthrobacter arilaitensis Re117, complete genomeputative MFS superfamily transporter4e-0756.2