Pre_GI: BLASTP Hits

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Query: NC_009515:307800:310577 Methanobrevibacter smithii ATCC 35061, complete genome

Start: 310577, End: 311137, Length: 561

Host Lineage: Methanobrevibacter smithii; Methanobrevibacter; Methanobacteriaceae; Methanobacteriales; Euryarchaeota; Archaea

General Information: Methanobrevibacter smithii ATCC 35061 (DSM 861) (strain PS) was isolated from a sewage digester in Gainesville, Florida, USA. Sewage digester isolate. Human gut methanogen. Methanobrevibacter smithii can be isolated from anoxic environments such as anaerobic digesters, anaerobic soil and sediment, and the gastrointestinal tracts of humans, ruminants and other animals. This organism is the dominant archaeal symbiont found in the human gut.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013665:918313:937836937836938390555Methanocella paludicola SANAE, complete genomeputative HTH-type transcriptional regulator9e-56216
NC_014222:799229:801202801202801756555Methanococcus voltae A3 chromosome, complete genometranscriptional regulator, XRE family1e-55215
NC_009614:821247:823492823492824046555Bacteroides vulgatus ATCC 8482 chromosome, complete genometranscriptional regulator2e-37154
NC_015577:3688071:370597937059793706536558Treponema azotonutricium ZAS-9 chromosome, complete genomeXRE family transcriptional regulator with cupin sensor8e-32136
NC_011898:1762000:178029717802971780845549Clostridium cellulolyticum H10, complete genometranscriptional regulator, XRE family4e-30130
NC_007974:1607500:162676616267661627521756Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, XRE family with cupin sensor domain3e-1684.7
NC_008314:1275617:128201212820121282749738Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator6e-1683.6
NC_012791:2386000:239303923930392393611573Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, XRE family3e-1374.7
NC_016025:552000:561697561697562284588Candidatus Chloracidobacterium thermophilum B chromosome chromosomeputative transcriptional regulator1e-1273.2
NC_006510:2910000:291967829196782920220543Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-1272.4
NC_014640:5047201:504847650484765049030555Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein3e-1271.6
NC_012808:2886282:289424728942472894843597Methylobacterium extorquens AM1, complete genomeputative transcriptional regulator, XRE family3e-1271.2
NC_014010:1850500:188064418806441881270627Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeDNA-binding protein6e-1270.5
NC_012108:946314:962372962372962944573Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (Cro/CI family protein)8e-1270.1
NC_012032:2925000:293613129361312936766636Chloroflexus sp. Y-400-fl, complete genometranscriptional regulator, XRE family1e-1169.3
NC_010175:2925084:294094629409462941581636Chloroflexus aurantiacus J-10-fl, complete genomeCupin 2 conserved barrel domain protein1e-1169.3
NC_012792:627500:634865634865635437573Variovorax paradoxus S110 chromosome 2, complete genometranscriptional regulator, XRE family2e-1168.9
NC_008148:2498000:252032625203262520988663Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, XRE family with cupin sensor2e-1168.6
NC_014966:795311:815631815631816254624Vibrio vulnificus MO6-24/O chromosome II, complete sequencetranscriptional regulator4e-1167.8
NC_009654:2940278:294247229424722943083612Marinomonas sp. MWYL1, complete genomeXRE family transcriptional regulator9e-1166.6
NC_014831:1843835:186641118664111867175765Thermaerobacter marianensis DSM 12885 chromosome, complete genomeCupin 2 conserved barrel domain protein1e-1066.2
NC_013939:1535071:155165715516571552193537Deferribacter desulfuricans SSM1, complete genomeXRE family transcriptional regulator4e-1064.7
NC_014328:1286407:130205613020561302601546Clostridium ljungdahlii ATCC 49587 chromosome, complete genometranscriptional regulator7e-1063.5
NC_012667:1045782:106175010617501062373624Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein2e-0962.4
NC_010511:4313769:431666343166634317268606Methylobacterium sp. 4-46 chromosome, complete genomeXRE family transcriptional regulator2e-0962
NC_012791:4794362:481375648137564814277522Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, XRE family2e-0962
NC_006350:1084930:108965110896511090214564Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative DNA-binding protein4e-0960.8
NC_009718:1411793:143010814301081430635528Fervidobacterium nodosum Rt17-B1, complete genomecupin 2 domain-containing protein5e-0960.8
NC_015276:2769000:277194627719462772557612Marinomonas mediterranea MMB-1 chromosome, complete genomehelix-turn-helix domain protein3e-0858.5
NC_003910:4234000:424542542454254246024600Colwellia psychrerythraea 34H, complete genomeDNA-binding protein5e-0857.4
NC_014654:2311818:232518923251892325725537Halanaerobium sp. 'sapolanicus' chromosome, complete genomeCupin 2 conserved barrel domain protein8e-0856.6
NC_009659:997779:100550010055001006123624Janthinobacterium sp. Marseille chromosome, complete genomeCro/CI family transcriptional regulator1e-0756.2
NC_009089:1283000:131939013193901319941552Clostridium difficile 630, complete genomeputative transcriptional regulator1e-0756.2
NC_004129:926479:931900931900932529630Pseudomonas fluorescens Pf-5, complete genomeDNA-binding protein1e-0755.8
NC_011757:517000:548476548476549072597Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, XRE family1e-0755.8
NC_007948:3502843:352327835232783523883606Polaromonas sp. JS666, complete genometranscriptional regulator, XRE family with cupin sensor domain2e-0755.5
NC_003910:2588000:260174326017432602339597Colwellia psychrerythraea 34H, complete genomeDNA-binding protein4e-0754.3
NC_015500:900807:900807900807901394588Treponema brennaborense DSM 12168 chromosome, complete genomehelix-turn-helix domain protein5e-0754.3
NC_009617:1487110:149075414907541491308555Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0652.8
NC_014931:2511423:251498125149812515391411Variovorax paradoxus EPS chromosome, complete genomeCupin 2 conserved barrel domain protein1e-0652.8
NC_014328:2518081:253808325380832538637555Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein2e-0652.4
UCMB5137:1:101211012110666546Bacillus atrophaeus UCMB-5137unknown3e-0651.6
NC_016641:2735054:274161127416112741856246Paenibacillus terrae HPL-003 chromosome, complete genomeXRE family transcriptional regulator5e-0650.8
NC_018524:301992:319448319448320035588Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehelix-turn-helix family protein6e-0650.4