Pre_GI: BLASTP Hits

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Query: NC_009512:469000:472370 Pseudomonas putida F1, complete genome

Start: 472370, End: 474052, Length: 1683

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:443122:4463894463894480711683Pseudomonas putida S16 chromosome, complete genomeamine oxidase01101
NC_015379:6226661:6254940625494062566221683Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative oxidoreductase01030
NC_014158:1479313:1480790148079014824871698Tsukamurella paurometabola DSM 20162 chromosome, complete genomeamine oxidase2e-173609
NC_003308:1:1637216372186392268Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencetryptophan 2-monooxygenase1e-44181
NC_003065:27163:4977549775520422268Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencetryptophan monooxygenase1e-44181
NC_009255:1250939:1250939125093912526361698Burkholderia vietnamiensis G4 chromosome 2, complete sequenceamine oxidase4e-44179
NC_014120:88679:98514985141002021689Burkholderia sp. CCGE1002 plasmid pBC201, complete sequenceamine oxidase8e-44178
NC_007005:1705406:1725786172578617274591674Pseudomonas syringae pv. syringae B728a, complete genomeAmine oxidase2e-43177
NC_011982:206784:2153462153462175172172Agrobacterium vitis S4 plasmid pTiS4, complete sequencetryptophan 2-monooxygenase5e-40166
NC_010627:532407:5405945405945422821689Burkholderia phymatum STM815 plasmid pBPHY02, complete sequenceamine oxidase2e-37157
NC_018664:159291:1629791629791646041626Clostridium acidurici 9a chromosome, complete genomeamine oxidase1e-26122
NC_010501:1286971:1302023130202313039571935Pseudomonas putida W619, complete genomeamine oxidase8e-1272.4
NC_020244:2049753:2066634206663420681331500Bacillus subtilis XF-1, complete genomehypothetical protein3e-0654.3
NC_014976:170683:1858431858431872671425Bacillus subtilis BSn5 chromosome, complete genomeamine oxidase, flavin-containing3e-0653.9
NC_009956:88354:1110911110911127161626Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequenceL-amino-acid oxidase4e-0653.5
NC_004193:1335626:1336825133682513382821458Oceanobacillus iheyensis HTE831, complete genomeL-amino acid oxidase5e-0653.1