Pre_GI: BLASTP Hits

Some Help

Query: NC_009512:1518113:1536247 Pseudomonas putida F1, complete genome

Start: 1536247, End: 1536885, Length: 639

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015873:790961:800227800227800916690Megasphaera elsdenii DSM 20460, complete genomedimethylmenaquinone methyltransferase5e-30130
NC_016582:93754:974799747998117639Streptomyces bingchenggensis BCW-1 chromosome, complete genomedimethylmenaquinone methyltransferase2e-25115
NC_013093:4890557:490029249002924900882591Actinosynnema mirum DSM 43827, complete genomeDimethylmenaquinone methyltransferase4e-25114
NC_016048:3899878:391144839114483912131684Oscillibacter valericigenes Sjm18-20, complete genomealdolase7e-24110
NC_010505:3690000:371358537135853714232648Methylobacterium radiotolerans JCM 2831, complete genomeDimethylmenaquinone methyltransferase8e-24110
NC_010086:1816378:182093918209391821637699Burkholderia multivorans ATCC 17616 chromosome 2, completeDimethylmenaquinone methyltransferase3e-23108
NC_015389:616430:635976635976636683708Coriobacterium glomerans PW2 chromosome, complete genomeDimethylmenaquinone methyltransferase3e-22105
NC_015137:2616222:262897226289722629649678Burkholderia sp. CCGE1001 chromosome 2, complete sequenceDimethylmenaquinone methyltransferase2e-22105
NC_015727:1076927:108099210809921081660669Cupriavidus necator N-1 plasmid BB1p, complete sequencedimethylmenaquinone methyltransferase MenG8e-22103
NC_014910:1050706:105552010555201056194675Alicycliphilus denitrificans BC chromosome, complete genomedimethylmenaquinone methyltransferase4e-21101
NC_011892:352652:361972361972362682711Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeDimethylmenaquinone methyltransferase7e-21100
NC_010511:3947948:395954139595413960167627Methylobacterium sp. 4-46 chromosome, complete genomedimethylmenaquinone methyltransferase1e-20100
NC_015186:2165628:218785521878552188535681Acidiphilium multivorum AIU301, complete genomeputative 4-carboxy-4-hydroxy-2-oxoadipate aldolase4e-2098.2
NC_012792:1091669:110844111084411109112672Variovorax paradoxus S110 chromosome 2, complete genomeDimethylmenaquinone methyltransferase5e-2097.8
NC_015733:1976752:199801119980111998688678Pseudomonas putida S16 chromosome, complete genomehypothetical protein4e-2097.8
NC_014206:2971304:298171029817102982435726Geobacillus sp. C56-T3 chromosome, complete genomedimethylmenaquinone methyltransferase1e-1996.7
NC_014258:127500:140638140638141330693Pantoea vagans C9-1 plasmid pPag3, complete sequenceputative demethylmenaquinone methyltransferase1e-1996.3
NC_009512:1518113:153004315300431530759717Pseudomonas putida F1, complete genome4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase2e-1995.5
NC_012660:4734363:473569747356974736362666Pseudomonas fluorescens SBW25 chromosome, complete genomeputative aldolase5e-1994.4
NC_016023:579000:602240602240602860621Bacillus coagulans 36D1 chromosome, complete genomeDimethylmenaquinone methyltransferase4e-1891.7
NC_011894:957897:967729967729968400672Methylobacterium nodulans ORS 2060, complete genomeDimethylmenaquinone methyltransferase5e-1891.3
NC_012522:3038890:304859130485913049262672Rhodococcus opacus B4, complete genomeputative 4-carboxy-4-hydroxy-2-oxoadipate aldolase7e-1890.5
NC_015634:652000:652074652074652694621Bacillus coagulans 2-6 chromosome, complete genomeDimethylmenaquinone methyltransferase2e-1789
NC_020911:3046916:306754330675433068232690Octadecabacter antarcticus 307, complete genomehypothetical protein2e-1788.6
NC_014817:29795:322763227632965690Asticcacaulis excentricus CB 48 chromosome 2, complete sequence4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase3e-1582
NC_009512:3618055:362013936201393620855717Pseudomonas putida F1, complete genome4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase6e-1580.9
NC_014974:1076565:108607210860721086740669Thermus scotoductus SA-01 chromosome, complete genomedimethylmenaquinone methyltransferase6e-1580.9
NC_019977:253895:2734122734122745631152Methanomethylovorans hollandica DSM 15978, complete genomeDemethylmenaquinone methyltransferase2e-1479
NC_015458:1692401:170369917036991704172474Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein3e-1478.6
NC_016604:3137694:314377031437703144462693Mycobacterium rhodesiae NBB3 chromosome, complete genome4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase3e-1478.6
NC_009712:669647:6707536707536720391287Candidatus Methanoregula boonei 6A8, complete genomebifunctional hexulose-6-phosphate synthase/ribonuclease regulator3e-1375.1
NC_013716:3327881:332997333299733330686714Citrobacter rodentium ICC168, complete genomeputative methyl transferase3e-1375.1
NC_015953:2681331:269576726957672696390624Streptomyces sp. SirexAA-E chromosome, complete genomeDimethylmenaquinone methyltransferase3e-1272
NC_009664:4423829:451675045167504517262513Kineococcus radiotolerans SRS30216, complete genomeregulator of ribonuclease activity A4e-1168.2
NC_013510:1295439:130282713028271303306480Thermomonospora curvata DSM 43183, complete genomeregulator of ribonuclease activity A9e-1167
NC_007951:2233676:223367622336762234383708Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative dimethylmenaquinone methyltransferase3e-1065.1
NC_014391:1910273:193815719381571938861705Micromonospora aurantiaca ATCC 27029 chromosome, complete genomedimethylmenaquinone methyltransferase3e-1065.1
NC_003911:2540453:256384325638432564538696Silicibacter pomeroyi DSS-3, complete genomealdolase, putative6e-1064.3
NC_014910:1765065:179211617921161792748633Alicycliphilus denitrificans BC chromosome, complete genomedimethylmenaquinone methyltransferase1e-0963.5
NC_018581:759932:779297779297779950654Gordonia sp. KTR9 chromosome, complete genomeDemethylmenaquinone methyltransferase2e-0962.4
NC_008309:190550:221104221104221604501Haemophilus somnus 129PT, complete genomeregulator of ribonuclease activity A7e-0960.8
NC_010519:71365:943079430794807501Haemophilus somnus 2336 chromosome, complete genomeribonuclease activity regulator protein RraA7e-0960.8
NC_009348:3261500:328116932811693281651483Aeromonas salmonicida subsp. salmonicida A449, complete genomeribonuclease activity regulator protein RraA1e-0859.7
NC_021150:2315362:232625823262582326746489Azotobacter vinelandii CA6, complete genomeribonuclease activity regulator protein RraA2e-0858.9
NC_012560:2315350:232624623262462326734489Azotobacter vinelandii DJ, complete genomeRegulator of ribonuclease activity A, RraA2e-0858.9
NC_013665:849508:8543158543158556011287Methanocella paludicola SANAE, complete genome3-hexulose-6-phosphate synthase1e-0757
NC_009511:2726296:274010027401002740816717Sphingomonas wittichii RW1 chromosome, complete genomedimethylmenaquinone methyltransferase1e-0756.6
NC_008146:2744612:2772982277298227745111530Mycobacterium sp. MCS, complete genome5-carboxymethyl-2-hydroxymuconate delta-isomerase2e-0756.2
NC_008705:2763131:2790870279087027923991530Mycobacterium sp. KMS, complete genome5-carboxymethyl-2-hydroxymuconate delta-isomerase2e-0756.2
NC_018581:759932:778611778611779300690Gordonia sp. KTR9 chromosome, complete genomeDemethylmenaquinone methyltransferase2e-0755.8
NC_009050:427000:449720449720450376657Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceDimethylmenaquinone methyltransferase8e-0753.9
NC_007494:739403:766355766355767011657Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceputative 4-hydroxy-4-methyl-2-oxoglutarate aldolase8e-0753.9
NC_014008:669170:675670675670676317648Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeDimethylmenaquinone methyltransferase1e-0653.5
NC_015976:814922:820533820533821201669Sphingobium sp. SYK-6, complete genomeputative aldolase2e-0652.8
NC_015563:4206112:421030442103044211011708Delftia sp. Cs1-4 chromosome, complete genomeDimethylmenaquinone methyltransferase2e-0652.4
NC_015065:18189:342723427235108837Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceDimethylmenaquinone methyltransferase3e-0651.6
NC_008343:61191:701307013070645516Granulibacter bethesdensis CGDNIH1, complete genomeS-adenosylmethionine:2-demethylmenaquinone methyltransferase4e-0651.6
NC_006526:1976779:200622020062202006927708Zymomonas mobilis subsp. mobilis ZM4, complete genomedemethylmenaquinone methyltransferase5e-0651.2