Pre_GI: BLASTP Hits

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Query: NC_009480:99640:132170 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 132170, End: 133801, Length: 1632

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009664:4423829:4449835444983544512321398Kineococcus radiotolerans SRS30216, complete genomeEndo-1,4-beta-xylanase2e-121436
NC_016582:8711199:8718179871817987192551077Streptomyces bingchenggensis BCW-1 chromosome, complete genomebeta-1,4-xylanase1e-44181
NC_016582:8711199:8719299871929987207201422Streptomyces bingchenggensis BCW-1 chromosome, complete genomebeta-1,4-xylanase1e-43178
NC_014210:2638773:2649757264975726508781122Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Endo-1,4-beta-xylanase1e-39165
NC_014623:9363409:9381076938107693827041629Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeendo-1,4-beta-xylanase z3e-39163
NC_013158:1085937:108593710859371086923987Halorhabdus utahensis DSM 12940, complete genomeEndo-1,4-beta-xylanase2e-38160
NC_016935:976059:9833889833889845121125Paenibacillus mucilaginosus 3016 chromosome, complete genomeendo-1,4-beta-xylanase2e-33144
NC_015690:977131:9806519806519817751125Paenibacillus mucilaginosus KNP414 chromosome, complete genomeendo-1,4-beta-xylanase2e-33144
NC_016023:915178:9397099397099407851077Bacillus coagulans 36D1 chromosome, complete genomeglycoside hydrolase family protein8e-33142
NC_010994:3477000:3478492347849234795651074Rhizobium etli CIAT 652, complete genomeendo-1,4-beta-xylanase protein (exopolysaccharide export)6e-33142
NC_016627:2799453:2801372280137228037592388Clostridium clariflavum DSM 19732 chromosome, complete genomebeta-1,4-xylanase6e-32139
NC_014915:1880748:189447518944751895470996Geobacillus sp. Y412MC52 chromosome, complete genomeEndo-1,4-beta-xylanase3e-30133
NC_013411:2739989:275453727545372755532996Geobacillus sp. Y412MC61, complete genomeEndo-1,4-beta-xylanase3e-30133
NC_010162:9311465:9311465931146593125261062Sorangium cellulosum 'So ce 56', complete genomeO-glycosyl hydrolase8e-30132
NC_011369:3022235:3022235302223530233081074Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeglycoside hydrolase5e-30132
NC_014318:5586287:5614314561431456159481635Amycolatopsis mediterranei U32 chromosome, complete genomeglycosyl hydrolase/beta-1,4-xylanase6e-29129
NC_014206:1745203:1752005175200517532281224Geobacillus sp. C56-T3 chromosome, complete genomeendo-1,4-beta-xylanase7e-28125
NC_020210:1908000:1922732192273219239551224Geobacillus sp. GHH01, complete genomeendo-1,4-beta-xylanase7e-28125
NC_009328:1867971:1878226187822618792271002Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeIntra-cellular xylanase4e-27123
NC_010003:225420:2398982398982430233126Petrotoga mobilis SJ95, complete genomeEndo-1,4-beta-xylanase4e-26119
NC_019970:929666:9354509354509364661017Thermoanaerobacterium thermosaccharolyticum M0795, complete genomebeta-1,4-xylanase1e-25118
NC_007604:1442500:1451255145125514523761122Synechococcus elongatus PCC 7942, complete genomeEndo-1,4-beta-xylanase9e-25115
NC_006576:161112:1684231684231695441122Synechococcus elongatus PCC 6301, complete genomeendo-1-beta-xylanase1e-24115
NC_014392:1769803:1796734179673418005313798Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeCellulose 1,4-beta-cellobiosidase2e-24114
NC_014720:980000:1006806100680610112364431Caldicellulosiruptor kronotskyensis 2002 chromosome, completecellulose 1,4-beta-cellobiosidase3e-24113
NC_009437:1189432:1216344121634412194633120Caldicellulosiruptor saccharolyticus DSM 8903, complete genomecellulose 1,4-beta-cellobiosidase3e-24113
NC_012034:1925983:1938607193860719430434437Anaerocellum thermophilum DSM 6725, complete genomeglycoside hydrolase family 484e-24113
NC_005773:5149768:5170444517044451715561113Pseudomonas syringae pv. phaseolicola 1448A, complete genomeglycosyl hydrolase, family 105e-24112
NC_014817:1063173:1066726106672610679431218Asticcacaulis excentricus CB 48 chromosome 2, complete sequenceendo-1,4-beta-xylanase3e-22107
NC_007005:5367454:5371848537184853729601113Pseudomonas syringae pv. syringae B728a, complete genomeEndo-1,4-beta-xylanase8e-21102
NC_010581:2999002:3007211300721130095232313Beijerinckia indica subsp. indica ATCC 9039, complete genomeEndo-1,4-beta-xylanase5e-1996.7
NC_013730:7743954:7763330776333077644931164Spirosoma linguale DSM 74, complete genomeEndo-1,4-beta-xylanase4e-1583.6
NC_014391:277555:2850832850832866931611Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeglycoside hydrolase family 10 protein2e-1171.6
NC_007912:4579873:4579873457987345834333561Saccharophagus degradans 2-40, complete genomeMethionine biosynthesis MetW8e-1168.9
NC_014391:277555:283411283411284016606Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeglycoside hydrolase family 10 protein2e-1067.8
NC_013410:3685588:3687972368797236896211650Fibrobacter succinogenes subsp. succinogenes S85 chromosome,glycoside hydrolase family protein2e-1067.4
NC_008752:3955327:396062439606243961601978Acidovorax avenae subsp. citrulli AAC00-1, complete genomeglycoside hydrolase, family 104e-1066.6
NC_015966:1145974:1166222116622211677181497Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeendo-1,4-beta-xylanase5e-0963.2