Pre_GI: BLASTP Hits

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Query: NC_009480:31412:74779 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 74779, End: 75633, Length: 855

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008752:3595516:361065836106583611569912Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein2e-68259
NC_009479:34001:553715537156213843Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmidhypothetical protein2e-25116
NC_009479:34001:534655346554298834Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmidputative extracellular serine protease3e-25115
NC_010399:13222:202782027821147870Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, completepat1 protein1e-24114
NC_009479:34001:520865208652940855Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmidhypothetical protein1e-22107
NC_010407:3132683:3145967314596731469891023Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative pat-1-like protein5e-22105
NC_010407:3132683:314414831441483144990843Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative pat-1-like protein4e-21102
NC_010399:13222:296322963230261630Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, completepat1 protein9e-21100
NC_009480:31412:487344873449567834Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative extracellular serine protease, family S1A2e-2099.8
NC_010408:79855:882658826589125861Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1,putative secreted protein8e-1890.9
NC_009480:31412:707857078571645861Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative extracellular serine protease, family S1 (chymotrypsin)2e-1686.3
NC_007508:5093365:510179751017975102339543Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative secreted protein3e-1375.9
NC_006087:1334500:134250513425051342879375Leifsonia xyli subsp. xyli str. CTCB07, complete genome5e-0962
NC_006087:2470708:248040724804072481348942Leifsonia xyli subsp. xyli str. CTCB07, complete genomepat1 protein5e-0858.5