Pre_GI: BLASTP Hits

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Query: NC_009480:31412:46243 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 46243, End: 46467, Length: 225

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008148:1859888:186634618663461867217872Rubrobacter xylanophilus DSM 9941, complete genome5e-1063.2
NC_008148:2498000:252970325297032530080378Rubrobacter xylanophilus DSM 9941, complete genomeputative transposase8e-1062.4
NC_003155:5443230:545563154556315456419789Streptomyces avermitilis MA-4680, complete genomeIS1648-like transposase1e-0962
NC_014151:3611956:363339936333993633791393Cellulomonas flavigena DSM 20109 chromosome, complete genometransposase2e-0961.6
NC_014221:1786122:180974818097481810607860Truepera radiovictrix DSM 17093 chromosome, complete genomeTransposase-like protein2e-0961.2
NC_008148:2498000:252159525215952521972378Rubrobacter xylanophilus DSM 9941, complete genomeTransposase and inactivated derivatives-like protein7e-0959.3
NC_015859:3126500:314326331432633143670408Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein9e-0958.9
NC_015859:3126500:313985031398503140257408Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein9e-0958.9
NC_014221:3175013:318648831864883187348861Truepera radiovictrix DSM 17093 chromosome, complete genome2e-0858.2
NC_013595:235931:242177242177242596420Streptosporangium roseum DSM 43021, complete genomeputative transposase2e-0858.2
NC_018681:5627940:564107756410775641298222Nocardia brasiliensis ATCC 700358 chromosome, complete genometransposase2e-0857.8
NC_014228:1712339:174251117425111743272762Xenorhabdus nematophila ATCC 19061, complete genometransposase9e-0855.5
NC_010572:82000:880088800888373366Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase9e-0855.5
NC_014228:2883500:290947029094702910231762Xenorhabdus nematophila ATCC 19061, complete genometransposase1e-0755.5
NC_015957:115133:126468126468127361894Streptomyces violaceusniger Tu 4113 chromosome, complete genometransposase IS4 family protein2e-0754.7
NC_010572:8408500:842315384231538424049897Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative IS1647-like transposase6e-0752.8
NC_010572:82000:121881121881122777897Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative IS1647-like transposase6e-0752.8
NC_004347:3028000:303831330383133039071759Shewanella oneidensis MR-1, complete genomehypothetical ISSod6, transposase6e-0752.8
NC_012803:1519138:152495415249541525337384Micrococcus luteus NCTC 2665, complete genometransposase7e-0752.8
NC_013172:783097:790139790139790423285Brachybacterium faecium DSM 4810, complete genomehypothetical protein8e-0752.4
NC_013172:783097:797302797302797586285Brachybacterium faecium DSM 4810, complete genomehypothetical protein8e-0752.4
NC_017904:4742775:476515547651554765550396Mycobacterium sp. MOTT36Y chromosome, complete genometransposase8e-0752.4
NC_020126:4622371:464416846441684644626459Myxococcus stipitatus DSM 14675, complete genomeIS5 family transposase OrfA1e-0651.6
NC_014228:3534378:354649135464913547102612Xenorhabdus nematophila ATCC 19061, complete genometransposase (fragment)2e-0650.8
NC_015953:2349503:236180623618062362231426Streptomyces sp. SirexAA-E chromosome, complete genomeputative IS1648 transposase3e-0650.8
NC_014032:269844:269844269844270233390Salinibacter ruber M8 chromosome, complete genometransposase3e-0650.8
NC_006087:237500:240436240436240831396Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase5e-0650.1
NC_013209:1925341:194770619477061948101396Acetobacter pasteurianus IFO 3283-01, complete genometransposase6e-0649.7
NC_017108:1925323:194768819476881948083396Acetobacter pasteurianus IFO 3283-12, complete genometransposase6e-0649.7
NC_017111:1925311:194767619476761948071396Acetobacter pasteurianus IFO 3283-32, complete genometransposase6e-0649.7
NC_017121:1925323:194768819476881948083396Acetobacter pasteurianus IFO 3283-07, complete genometransposase6e-0649.7
NC_017150:1833087:185545218554521855847396Acetobacter pasteurianus IFO 3283-01-42C, complete genometransposase6e-0649.7
NC_017150:1833087:186720218672021867573372Acetobacter pasteurianus IFO 3283-01-42C, complete genometransposase7e-0649.3
NC_013595:5176000:519369751936975194227531Streptosporangium roseum DSM 43021, complete genomehypothetical protein7e-0649.3
NC_008686:50750:712487124871667420Paracoccus denitrificans PD1222 chromosome 1, complete sequencetransposase9e-0648.9
NC_010660:175200:198186198186198635450Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceputative transposase9e-0648.9
NC_012803:691215:712266712266712655390Micrococcus luteus NCTC 2665, complete genometransposase1e-0548.9
NC_012803:2454380:246307524630752463464390Micrococcus luteus NCTC 2665, complete genometransposase1e-0548.9