Pre_GI: BLASTP Hits

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Query: NC_009439:574437:575473 Pseudomonas mendocina ymp, complete genome

Start: 575473, End: 576909, Length: 1437

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:617020:6177816177816192171437Pseudomonas mendocina NK-01 chromosome, complete genomepeptidase M48, Ste24p0822
NC_009720:2489003:2491830249183024933921563Xanthobacter autotrophicus Py2, complete genomepeptidase M48 Ste24p1e-39164
NC_007677:71532:7288072880743551476Salinibacter ruber DSM 13855, complete genomepeptidase, M48 family2e-38160
NC_014032:71724:7300273002745641563Salinibacter ruber M8 chromosome, complete genomehypothetical protein2e-38160
NC_008783:119758:1420851420851435001416Bartonella bacilliformis KC583, complete genomepeptidase, M48 family2e-37157
NC_014932:1387818:1387818138781813892511434Bartonella clarridgeiae 73, complete genomehypothetical protein6e-34145
NC_014836:155924:1606121606121619341323Desulfurispirillum indicum S5 chromosome, complete genomepeptidase M48 Ste24p4e-29129
NC_010730:578493:5956995956995969731275Sulfurihydrogenibium sp. YO3AOP1, complete genomepeptidase M48 Ste24p4e-27122
NC_011296:801612:8165938165938178761284Thermodesulfovibrio yellowstonii DSM 11347, complete genomepeptidase, M48 family1e-25118
NC_015388:2499187:252103825210382521829792Desulfobacca acetoxidans DSM 11109 chromosome, complete genomepeptidase M48 Ste24p1e-22107
NC_005861:695130:707544707544708398855Candidatus Protochlamydia amoebophila UWE25, complete genomehypothetical protein2e-22107
NC_019940:1540434:154345615434561544262807Thioflavicoccus mobilis 8321 chromosome, complete genomePeptidase family M482e-20100
NC_012667:839318:839318839318840109792Vibrio cholerae MJ-1236 chromosome 2, complete genomeZn-dependent protease with chaperone function4e-2099.8
NC_014033:619469:648682648682649563882Prevotella ruminicola 23 chromosome, complete genomeM48 family peptidase5e-1995.9
NC_020418:2718500:2721111272111127225741464Morganella morganii subsp. morganii KT, complete genomeExported zinc metalloprotease YfgC precursor1e-1895.1
NC_008789:2057368:207273820727382073685948Halorhodospira halophila SL1, complete genomepeptidase M48, Ste24p4e-1893.2
NC_019757:3869047:386904738690473869925879Cylindrospermum stagnale PCC 7417, complete genomePeptidase family M484e-1892.8
NC_015164:1952500:196997119699711970768798Bacteroides salanitronis DSM 18170 chromosome, complete genomepeptidase M48 Ste24p2e-1790.9
NC_007973:499606:5145765145765163931818Ralstonia metallidurans CH34 chromosome 1, complete sequencepeptidase M48, Ste24p5e-1686.3
NC_011768:3385719:3385719338571933872511533Desulfatibacillum alkenivorans AK-01, complete genomepeptidase M48 Ste24p5e-1686.3
NC_010501:4379920:4400566440056644020021437Pseudomonas putida W619, complete genomepeptidase M48 Ste24p8e-1685.5
NC_016613:2628843:2642496264249626439471452Vibrio sp. EJY3 chromosome 1, complete sequencezinc metalloprotease5e-1582.8
NC_004578:4465247:4465247446524744666801434Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein6e-1582.4
NC_007404:1260500:127305612730561273832777Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein9e-1582
NC_020541:2694836:271327027132702714067798Rhodanobacter sp. 2APBS1, complete genomePeptidase family M481e-1481.6
NC_012791:5496175:5496175549617554977401566Variovorax paradoxus S110 chromosome 1, complete genomepeptidase M48 Ste24p2e-1480.9
NC_011979:646518:6489696489696500361068Geobacter sp. FRC-32, complete genomepeptidase M48 Ste24p2e-1480.9
NC_016629:2971860:2973764297376429751851422Desulfovibrio africanus str. Walvis Bay chromosome, completepeptidase M48 Ste24p4e-1479.7
NC_014010:1850500:187522218752221876172951Candidatus Puniceispirillum marinum IMCC1322 chromosome, completepeptidase M48, Ste24p1e-1378.6
NC_018080:4436646:4458130445813044595631434Pseudomonas aeruginosa DK2 chromosome, complete genomePutative Zn-dependent protease2e-1377.4
NC_002516:1031386:1089010108901010904431434Pseudomonas aeruginosa PAO1, complete genomehypothetical protein2e-1377.4
NC_015422:4822636:4828614482861448301401527Alicycliphilus denitrificans K601 chromosome, complete genomepeptidase M48 Ste24p2e-1377.4
NC_012660:1579204:1617013161701316184461434Pseudomonas fluorescens SBW25 chromosome, complete genomeputative peptidase4e-1376.6
NC_018868:1271742:1294290129429012958011512Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomepeptidase family M48 family protein5e-1376.3
NC_003919:1203405:1204277120427712059231647Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein9e-1375.5
NC_011992:3615517:3621373362137336229381566Acidovorax ebreus TPSY, complete genomepeptidase M48 Ste24p1e-1275.1
NC_010002:960027:9655949655949672191626Delftia acidovorans SPH-1, complete genomepeptidase M48 Ste24p2e-1273.9
NC_015563:6357653:6373190637319063748151626Delftia sp. Cs1-4 chromosome, complete genomepeptidase M48 Ste24p3e-1273.9
NC_015138:5276857:5281896528189652835601665Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completepeptidase M48 Ste24p7e-1272.4
NC_008781:4178115:4181999418199941836481650Polaromonas naphthalenivorans CJ2, complete genomepeptidase M48, Ste24p8e-1272
NC_008752:5213431:5219239521923952209031665Acidovorax avenae subsp. citrulli AAC00-1, complete genomepeptidase M48, Ste24p1e-1171.2
NC_002488:1:804280428962921Xylella fastidiosa 9a5c, complete genomehypothetical protein3e-1170.1
NC_008599:128431:128431128431129237807Campylobacter fetus subsp. fetus 82-40, complete genomepeptidase M48, Ste24p6e-1169.3
NC_015385:2050648:205064820506482051457810Treponema succinifaciens DSM 2489 chromosome, complete genomepeptidase M48 Ste24p9e-1168.6
NC_015581:1891409:189616018961601896993834Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomepeptidase M48 Ste24p2e-1067.4
NC_016745:3170384:317038431703843171124741Oceanimonas sp. GK1 chromosome, complete genomeTPR repeat-containing Zn-dependent protease2e-1067.4
NC_004556:1:812781278942816Xylella fastidiosa Temecula1, complete genomehypothetical protein1e-0965.1
NC_010577:1:801880188833816Xylella fastidiosa M23, complete genomepeptidase M48 Ste24p1e-0965.1
NC_014759:1999000:201982120198212020603783Marivirga tractuosa DSM 4126 chromosome, complete genomepeptidase m48 ste24p2e-0964.3
NC_008702:1094663:111616311161631116984822Azoarcus sp. BH72, complete genomeconserved hypothetical secreted protein5e-0962.8
NC_014931:6415940:6416303641630364178801578Variovorax paradoxus EPS chromosome, complete genomepeptidase M48 Ste24p7e-0962.4
NC_015677:3965716:3970983397098339724881506Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein1e-0862
NC_014973:243000:253913253913254773861Geobacter sp. M18 chromosome, complete genomepeptidase M48 Ste24p2e-0861.2
NC_011891:4104000:4105445410544541065961152Anaeromyxobacter dehalogenans 2CP-1, complete genomepeptidase M48 Ste24p2e-0860.8
NC_019940:1670262:169189316918931692498606Thioflavicoccus mobilis 8321 chromosome, complete genome3e-0860.5
NC_015164:2626503:264672326467232647535813Bacteroides salanitronis DSM 18170 chromosome, complete genomepeptidase M48 Ste24p5e-0859.7
NC_009675:3067567:3084645308464530858321188Anaeromyxobacter sp. Fw109-5 chromosome, complete genomepeptidase M48 Ste24p8e-0858.9
NC_011146:603429:6217206217206227511032Geobacter bemidjiensis Bem, complete genomepeptidase M48 Ste24p1e-0758.2
NC_007760:4055860:4062841406284140639921152Anaeromyxobacter dehalogenans 2CP-C, complete genomepeptidase M48, Ste24p4e-0756.6
NC_007645:6991163:699263469926346993395762Hahella chejuensis KCTC 2396, complete genomeputative Zn-dependent protease, contains TPR repeats6e-0756.2
NC_015437:27325:7799577995798271833Selenomonas sputigena ATCC 35185 chromosome, complete genomepeptidase M48 Ste24p6e-0755.8
NC_002978:618723:6397476397476410271281Wolbachia endosymbiont of Drosophila melanogaster, complete genomepeptidase, M48 family9e-0755.5
NC_014311:3348102:335148733514873352431945Ralstonia solanacearum PSI07 chromosome, complete genomemembrane-associated zinc metalloprotease, peptidase M48, Ste24p2e-0654.3
NC_012416:531772:5347525347525360321281Wolbachia sp. wRi, complete genomepeptidase, M48 family2e-0654.3
NC_014311:2831620:2845992284599228470681077Ralstonia solanacearum PSI07 chromosome, complete genomepeptidase, M48 Ste24p family2e-0653.9
NC_009943:1364536:1364536136453613656271092Candidatus Desulfococcus oleovorans Hxd3, complete genomepeptidase M48 Ste24p5e-0652.8