Pre_GI: BLASTP Hits

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Query: NC_009438:3019552:3040389 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 3040389, End: 3041444, Length: 1056

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009348:161244:1641291641291651871059Aeromonas salmonicida subsp. salmonicida A449, complete genomeacyl protein synthase3e-138491
NC_008570:4594436:4623732462373246247901059Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomelong-chain-fatty-acid--luciferin-component ligase, Acyl-protein synthase2e-135482
NC_017075:4421486:4436022443602244371101089Rubrivivax gelatinosus IL144, complete genomeacyl-protein synthetase, LuxE1e-97357
NC_013956:2523955:2531254253125425323331080Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-89329
NC_014387:2661496:2686572268657226876331062Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeacyl-protein synthetase6e-84311
NC_015873:380485:3952343952343963011068Megasphaera elsdenii DSM 20460, complete genomeacyl-protein synthetase1e-83310
NC_010125:3067301:3088702308870230897421041Gluconacetobacter diazotrophicus PAl 5, complete genomeputative long-chain-fatty-acid--luciferin-component ligase2e-83309
NC_009712:1822375:1822375182237518235051131Candidatus Methanoregula boonei 6A8, complete genomeacyl-protein synthetase, LuxE6e-65248
NC_007796:3422000:3450885345088534520031119Methanospirillum hungatei JF-1, complete genomeacyl-protein synthetase, LuxE2e-60233
NC_007796:3379614:3385266338526633863991134Methanospirillum hungatei JF-1, complete genomeacyl-protein synthetase, LuxE3e-60232
NC_017270:220282:2402852402852427622478Vibrio cholerae LMA3984-4 chromosome chromosome I, completeAcyl protein synthase/acyl-CoA reductase RfbN8e-49194
NC_016944:238580:2573032573032597802478Vibrio cholerae IEC224 chromosome I, complete sequenceacyl protein synthase/acyl-CoA reductase RfbN8e-49194
NC_016445:2663837:2682560268256026850372478Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeacyl protein synthase/acyl-CoA reductase RfbN8e-49194
NC_012668:368305:3792173792173816942478Vibrio cholerae MJ-1236 chromosome 1, complete sequenceacyl protein synthase/acyl-CoA reductase RfbN8e-49194
NC_012582:272320:2910432910432935202478Vibrio cholerae O395 chromosome chromosome I, complete sequenceacyl protein synthase/acyl-CoA reductase8e-49194
NC_012578:224559:2432802432802457572478Vibrio cholerae M66-2 chromosome I, complete sequenceacyl protein synthase/acyl-CoA reductase8e-49194
NC_009457:2764972:2783695278369527861722478Vibrio cholerae O395 chromosome 2, complete sequenceacyl protein synthase/acyl-CoA reductase RfbN8e-49194
NC_002505:238569:2572922572922597692478Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeacyl protein synthase/acyl-CoA reductase RfbN8e-49194
NC_008786:3323167:3340915334091533420901176Verminephrobacter eiseniae EF01-2, complete genomeacyl-protein synthetase, LuxE2e-0963.5