Pre_GI: BLASTP Hits

Some Help

Query: NC_009381:1783886:1827898 Yersinia pestis Pestoides F chromosome, complete genome

Start: 1827898, End: 1828617, Length: 720

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008149:3251196:327523232752323275951720Yersinia pestis Nepal516, complete genomehypothetical protein4e-140497
NC_011149:309556:311785311785312507723Salmonella enterica subsp. enterica serovar Agona str. SL483,putative methyltransferase6e-90330
NC_016902:3863932:387567338756733876395723Escherichia coli KO11FL chromosome, complete genometype 11 methyltransferase6e-89327
CP002516:3863932:387567338756733876395723Escherichia coli KO11, complete genomeMethyltransferase type 116e-89327
CP002185:234719:235508235508236230723Escherichia coli W, complete genomeputative S-adenosyl-L-methionine-dependent methyltransferase6e-89327
NC_016822:246715:247504247504248226723Shigella sonnei 53G, complete genomehypothetical protein4e-88323
NC_009901:2915939:293374729337472934487741Shewanella pealeana ATCC 700345, complete genomeMethyltransferase type 114e-37154
NC_008321:2569315:258790625879062588640735Shewanella sp. MR-4, complete genomeMethyltransferase type 118e-36150
NC_015856:1733500:173613517361351737001867Collimonas fungivorans Ter331 chromosome, complete genomeSAM-dependent methyltransferase5e-1891.3
NC_010531:708049:724314724314725132819Polynucleobacter necessarius STIR1, complete genomeMethyltransferase type 112e-1789.4
NC_005085:1269787:132089913208991321663765Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein9e-1684
NC_015731:1731896:174187917418791742652774Nitrosomonas sp. Is79A3 chromosome, complete genometype 11 methyltransferase4e-1581.6
NC_014910:1765065:178952517895251790307783Alicycliphilus denitrificans BC chromosome, complete genomemethyltransferase type 118e-1373.9
NC_014722:771483:790604790604791416813Burkholderia rhizoxinica HKI 454, complete genomemethyltransferase1e-1170.5
NC_008313:2685531:268641326864132687144732Ralstonia eutropha H16 chromosome 1, complete sequenceMethyltransferase3e-1168.9
NC_010524:2117347:213870721387072139528822Leptothrix cholodnii SP-6, complete genomehypothetical protein3e-0858.9