Pre_GI: BLASTP Hits

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Query: NC_009092:4337617:4348874 Shewanella loihica PV-4, complete genome

Start: 4348874, End: 4349653, Length: 780

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009901:4899535:491611549161154916876762Shewanella pealeana ATCC 700345, complete genomeprotein of unknown function DUF5482e-106385
NC_010634:4463727:449636244963624497132771Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein1e-79296
NC_014121:5000069:502181250218125022549738Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative methyltransferase7e-77286
NC_006905:3717306:371730637173063718064759Salmonella enterica subsp. enterica serovar Choleraesuis strputative SAM-dependent methyltransferase4e-76284
NC_009778:4188000:419011741901174190869753Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-76283
NC_016822:3923908:394061339406133941365753Shigella sonnei 53G, complete genomeputative methyltransferase6e-76283
CP002185:3822470:383786038378603838612753Escherichia coli W, complete genomepredicted SAM-dependent methyltransferase6e-76283
NC_004337:3590323:361806636180663618818753Shigella flexneri 2a str. 301, complete genomehypothetical protein6e-76283
CU928145:3983432:400718840071884007940753Escherichia coli 55989 chromosome, complete genomeputative SAM-dependent methyltransferase6e-76283
NC_011748:3983432:400718840071884007940753Escherichia coli 55989, complete genomeputative methyltransferase6e-76283
NC_004741:4132056:415503041550304155782753Shigella flexneri 2a str. 2457T, complete genomehypothetical protein6e-76283
NC_007384:3897000:391373239137323914484753Shigella sonnei Ss046, complete genomehypothetical protein6e-76283
NC_010473:3722571:373814837381483738900753Escherichia coli str. K-12 substr. DH10B, complete genomepredicted SAM-dependent methyltransferase6e-76283
NC_010468:231000:250324250324251076753Escherichia coli ATCC 8739, complete genomeprotein of unknown function DUF5486e-76283
NC_007613:3470314:348734034873403488092753Shigella boydii Sb227, complete genomehypothetical protein6e-76283
NC_013941:4249871:426528342652834266035753Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein6e-76283
NC_012967:3549880:357307035730703573822753Escherichia coli B str. REL606 chromosome, complete genomeputative methyltransferase6e-76283
NC_012947:248000:267354267354268106753Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completemethyltransferase6e-76283
NC_011751:4074586:408997240899724090724753Escherichia coli UMN026 chromosome, complete genomeputative methyltransferase6e-76283
NC_010498:3838419:385380538538053854557753Escherichia coli SMS-3-5, complete genomehypothetical protein6e-76283
AC_000091:3995233:399728339972833998035753Escherichia coli W3110 DNA, complete genomepredicted SAM-dependent methyltransferase6e-76283
NC_000913:3624826:364040336404033641155753Escherichia coli K12, complete genomepredicted SAM-dependent methyltransferase6e-76283
NC_012913:1867276:186944118694411870196756Aggregatibacter aphrophilus NJ8700, complete genomeDNA polymerase I1e-65249
NC_013416:16493:330983309833856759Aggregatibacter actinomycetemcomitans D11S-1, complete genomeDNA polymerase I3e-65248
NC_016513:317197:335475335475336167693Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNA polymerase I4e-59228
NC_010995:1139867:115746611574661158266801Cellvibrio japonicus Ueda107, complete genomehypothetical protein8e-46183
NC_014221:1167261:118301111830111183811801Truepera radiovictrix DSM 17093 chromosome, complete genomeprotein of unknown function DUF5487e-42171
NC_003116:1734000:175083717508371751589753Neisseria meningitidis Z2491, complete genomehypothetical protein1e-35149
NC_009667:1076718:109392110939211094538618Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencehypothetical protein5e-35147