Pre_GI: BLASTP Hits

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Query: NC_009092:4337617:4339825 Shewanella loihica PV-4, complete genome

Start: 4339825, End: 4341783, Length: 1959

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015424:3520783:3561329356132935632661938Aeromonas veronii B565 chromosome, complete genomemethyl-accepting chemotaxis protein1e-36155
NC_009439:794498:7964437964437984071965Pseudomonas mendocina ymp, complete genomemethyl-accepting chemotaxis sensory transducer2e-0964.7
NC_007005:2686551:2731882273188227337411860Pseudomonas syringae pv. syringae B728a, complete genomeHistidine kinase, HAMP region:Bacterial chemotaxis sensory transducer9e-0962.4
NC_008570:3777469:3792087379208737939581872Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomemethyl-accepting chemotaxis protein4e-0860.5
NC_011184:2421687:2437333243733324389581626Vibrio fischeri MJ11 chromosome I, complete sequencemethyl-accepting chemotaxis protein5e-0860.1
NC_016745:3170384:3171382317138231730041623Oceanimonas sp. GK1 chromosome, complete genomemethyl-accepting chemotaxis sensory transducer6e-0859.7
NC_010424:697187:7157487157487177872040Candidatus Desulforudis audaxviator MP104C, complete genomemethyl-accepting chemotaxis sensory transducer2e-0758.5
NC_008700:2788363:2791205279120527928691665Shewanella amazonensis SB2B, complete genomeputative methyl-accepting chemotaxis sensory transducer4e-0757.4
NC_013456:2528284:2529887252988725315241638Vibrio sp. Ex25 chromosome 1, complete genomemethyl-accepting chemotaxis protein4e-0757
NC_004578:1153738:1156819115681911586991881Pseudomonas syringae pv. tomato str. DC3000, complete genomemethyl-accepting chemotaxis protein8e-0756.2
NC_004578:3817330:3820066382006638217451680Pseudomonas syringae pv. tomato str. DC3000, complete genomemethyl-accepting chemotaxis protein1e-0655.8
NC_008750:807446:8265698265698282331665Shewanella sp. W3-18-1, complete genomemethyl-accepting chemotaxis sensory transducer4e-0653.9
NC_016745:2280375:2283089228308922850231935Oceanimonas sp. GK1 chromosome, complete genomeputative methyl-accepting chemotaxis sensory transducer6e-0653.5
NC_008740:3602367:3609812360981236116291818Marinobacter aquaeolei VT8, complete genomemethyl-accepting chemotaxis sensory transducer8e-0652.8