Pre_GI: BLASTP Hits

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Query: NC_009092:2902171:2909622 Shewanella loihica PV-4, complete genome

Start: 2909622, End: 2910239, Length: 618

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014012:3356629:335662933566293357249621Shewanella violacea DSS12, complete genomeTonB2 protein7e-75279
NC_011663:3181579:318282931828293183449621Shewanella baltica OS223 chromosome, complete genomeTonB family protein5e-74276
NC_009052:1899954:192276919227691923389621Shewanella baltica OS155, complete genomeTonB family protein9e-74276
NC_008321:2922000:292384829238482924471624Shewanella sp. MR-4, complete genomeTonB family protein2e-73275
NC_008322:2983951:298767229876722988295624Shewanella sp. MR-7, complete genomeTonB family protein2e-73275
NC_008577:3125675:312748631274863128109624Shewanella sp. ANA-3 chromosome 1, complete sequenceTonB family protein8e-73273
NC_014541:1280835:129864812986481299262615Ferrimonas balearica DSM 9799 chromosome, complete genomeouter membrane transport energization protein TonB6e-57220
NC_008228:3608909:361016836101683610782615Pseudoalteromonas atlantica T6c, complete genomeTonB family protein6e-52203
NC_018679:2211000:222962722296272230319693Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeTonB family protein5e-26117
NC_014315:2659479:267766626776662678319654Nitrosococcus watsoni C-113 chromosome, complete genomeTonB family protein6e-1684
NC_018679:2541986:255273925527392553098360Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeTonB family protein3e-1375.1
NC_010995:1139867:115670411567041157363660Cellvibrio japonicus Ueda107, complete genomeTonB22e-0962.8
NC_013943:1019213:101857510185751019255681Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeTonB family protein4e-0961.2
NC_012779:1629731:164020816402081641059852Edwardsiella ictaluri 93-146, complete genomeprotein TonB6e-0960.8
NC_009801:1392696:141428814142881415007720Escherichia coli E24377A, complete genomeprotein tonB3e-0858.5
NC_010473:1384000:139850913985091399228720Escherichia coli str. K-12 substr. DH10B, complete genomemembrane spanning protein in TonB-ExbB-ExbD complex3e-0858.5
NC_007384:2007467:200790520079052008624720Shigella sonnei Ss046, complete genomeTonB3e-0858.5
NC_013364:1997891:200214320021432002862720Escherichia coli O111:H- str. 11128, complete genomemembrane spanning protein TonB3e-0858.5
NC_007712:2287053:229030522903052291000696Sodalis glossinidius str. 'morsitans', complete genomemembrane protein TonB6e-0857.4
NC_007606:1209132:122019112201911220910720Shigella dysenteriae Sd197, complete genomeTonB6e-0857.4
NC_011283:2185462:220157322015732202310738Klebsiella pneumoniae 342 chromosome, complete genometransporter9e-0857
NC_013850:2103469:213498421349842135721738Klebsiella variicola At-22 chromosome, complete genomeTonB family protein9e-0857
NC_010995:1139867:1155076115507611565901515Cellvibrio japonicus Ueda107, complete genomepeptidase, M56 family2e-0755.5
NC_020063:2011019:201458420145842015315732Enterobacteriaceae bacterium strain FGI 57, complete genomeTonB family protein1e-0653.5
NC_020409:77414:785777857779239663Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeTonB family protein8e-0650.4