Pre_GI: BLASTP Hits

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Query: NC_009092:1989977:2015016 Shewanella loihica PV-4, complete genome

Start: 2015016, End: 2015687, Length: 672

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014541:1165991:119702411970241197692669Ferrimonas balearica DSM 9799 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit7e-81300
NC_014836:1180454:118218011821801182899720Desulfurispirillum indicum S5 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit5e-36150
NC_014216:1061265:107576610757661076455690Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit9e-36150
NC_007575:1484305:150028115002811501012732Sulfurimonas denitrificans DSM 1251, complete genomenickel-dependent hydrogenase b-type cytochrome subunit2e-31135
NC_020411:28995:466544665447349696Hydrogenobaculum sp. HO, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit7e-23107
NC_015557:30622:466204662047315696Hydrogenobaculum sp. 3684 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit7e-23107
NC_015587:28997:466564665647351696Hydrogenobaculum sp. SHO chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit7e-23107
NC_013851:2610847:262691226269122627610699Allochromatium vinosum DSM 180 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit5e-1891.3
NC_011830:2940500:294056129405612941184624Desulfitobacterium hafniense DCB-2, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit1e-1789.7
NC_009720:2424975:243662124366212437373753Xanthobacter autotrophicus Py2, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit4e-1684.7
NC_012483:3529895:353655035365503537344795Acidobacterium capsulatum ATCC 51196, complete genomenickel-iron hydrogenase, b-type cytochrome subunit4e-1581.3
NC_011060:1947795:194910719491071949790684Pelodictyon phaeoclathratiforme BU-1, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit2e-1479.3
NC_018515:937994:954045954045954635591Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit2e-1479.3
NC_011059:921690:938527938527939216690Prosthecochloris aestuarii DSM 271, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit8e-1477.4
NC_018515:3411276:341443934144393415137699Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit4e-1271.6
NC_011745:1055354:107828710782871078994708Escherichia coli ED1a chromosome, complete genomehydrogenase 1 b-type cytochrome subunit6e-1270.9
NC_015499:352934:363157363157363738582Thermodesulfobium narugense DSM 14796 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit7e-1270.9
NC_017192:1933106:194179019417901942494705Arcobacter sp. L, complete genomeNi/Fe hydrogenase cytochrome b subunit3e-1168.9
NC_003198:1463253:148298414829841483712729Salmonella enterica subsp. enterica serovar Typhi str. CT18,Ni/Fe-hydrogenase 1 b-type cytochrome subunit HyaC25e-1168.2
NC_003197:1611302:161130216113021612045744Salmonella typhimurium LT2, complete genomeputative Ni/Fe hydrogenase 1 b-type cytochrome subunit5e-1167.8
NC_015761:1488807:148880714888071489535729Salmonella bongori NCTC 12419, complete genomeNi/Fe-hydrogenase 1 b-type cytochrome subunit HyaC25e-1167.8
NC_016856:1621279:162127916212791622022744Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative Ni/Fe hydrogenase 1 b-type cytochrome subunit5e-1167.8
NC_010067:1414000:143137214313721432100729Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-1167.4
NC_010067:1116148:111674111167411117472732Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-1065.5
NC_009921:4035225:403694340369434037629687Frankia sp. EAN1pec, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit3e-0755.5
NC_004463:1872537:189177418917741892508735Bradyrhizobium japonicum USDA 110, complete genomeHupC protein homolog1e-0653.5
NC_017249:8358438:836198283619828362674693Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-0653.1