Pre_GI: BLASTP Hits

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Query: NC_009012:1934107:1935906 Clostridium thermocellum ATCC 27405, complete genome

Start: 1935906, End: 1936760, Length: 855

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015385:2135456:215465921546592155537879Treponema succinifaciens DSM 2489 chromosome, complete genomephosphate ABC transporter, phosphate-binding protein, putative5e-69261
NC_010163:1361217:136121713612171362161945Acholeplasma laidlawii PG-8A chromosome, complete genomeABC transporter substrate-binding protein2e-25116
NC_009922:315870:315870315870316721852Alkaliphilus oremlandii OhILAs, complete genomephosphate binding protein5e-24111
NC_014392:2513529:2517202251720225183471146Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomephosphate binding protein1e-23110
NC_018870:484000:502811502811503650840Thermacetogenium phaeum DSM 12270 chromosome, complete genomephosphate-binding protein PstS2e-23109
NC_014376:386650:393807393807394730924Clostridium saccharolyticum WM1 chromosome, complete genomephosphate binding protein1e-1687
NC_007681:402773:403679403679404497819Methanosphaera stadtmanae DSM 3091, complete genomePstS2e-1582.8
NC_016614:1178000:121374412137441214571828Vibrio sp. EJY3 chromosome 2, complete sequenceABC transporter, periplasmic substrate-binding protein1e-1480.9
NC_013457:1703201:171770517177051718529825Vibrio sp. Ex25 chromosome 2, complete genomeABC transporter substrate-binding protein2e-1479.7
NC_020291:1389114:139860013986001399511912Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephosphate-binding protein PstS7e-1271.2
NC_013895:66641:856458564586475831Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completephosphate binding protein3e-1169.3
NC_014623:4662990:468085846808584681682825Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephosphate ABC transporter periplasmic phosphate-binding protein6e-1168.2
NC_007644:469181:475451475451476380930Moorella thermoacetica ATCC 39073, complete genomePhosphate binding protein2e-1066.2
NC_010003:2134878:213737721373772138201825Petrotoga mobilis SJ95, complete genomephosphate binding protein5e-1065.5
NC_009614:4844000:485361048536104854428819Bacteroides vulgatus ATCC 8482 chromosome, complete genomephosphate ABC transporter substrate-binding protein5e-1065.1
NC_011145:4628000:465804546580454658863819Anaeromyxobacter sp. K, complete genomephosphate binding protein1e-0963.9
NC_006347:3166000:316919431691943170006813Bacteroides fragilis YCH46, complete genomephosphate ABC transporter phosphate-binding protein5e-0962
NC_016048:375676:379154379154379597444Oscillibacter valericigenes Sjm18-20, complete genomephosphate ABC transporter phosphate binding protein5e-0962
NC_014246:1545214:156661015666101567536927Mobiluncus curtisii ATCC 43063 chromosome, complete genomephosphate ABC transporter ATP-binding protein6e-0961.6
NC_016584:2244966:224760822476082248522915Desulfosporosinus orientis DSM 765 chromosome, complete genomephosphate binding protein6e-0961.6
NC_003228:3212500:323053532305353231386852Bacteroides fragilis NCTC 9343, complete genomeputative phosphate-related ABC transport system, exported protein5e-0961.6
NC_016776:3258939:326794332679433268794852Bacteroides fragilis 638R, complete genomeputative phosphate-related ABC transport system, exported protein5e-0961.6
NC_010610:1385066:141485014148501415731882Lactobacillus fermentum IFO 3956, complete genomephosphate ABC transporter substrate-binding component1e-0860.5
NC_021175:845370:845370845370846251882Streptococcus oligofermentans AS 1.3089, complete genomephosphate transport protein3e-0859.3
NC_006177:835459:836194836194837048855Symbiobacterium thermophilum IAM 14863, complete genomephosphate ABC transporter phosphate-binding protein5e-0858.5
NC_014171:723155:727397727397728299903Bacillus thuringiensis BMB171 chromosome, complete genomephosphate-binding protein4e-0858.5
NC_009092:3239500:324714132471413248112972Shewanella loihica PV-4, complete genomephosphate binding protein1e-0757.4
NC_015676:546895:565256565256566107852Methanosalsum zhilinae DSM 4017 chromosome, complete genomephosphate binding protein1e-0757
NC_009633:4733678:473853047385304739441912Alkaliphilus metalliredigens QYMF chromosome, complete genomephosphate binding protein2e-0756.6
NC_008554:840079:858028858028859020993Syntrophobacter fumaroxidans MPOB, complete genomephosphate binding protein3e-0755.8
NC_011740:3453455:3460335346033534619001566Escherichia fergusonii ATCC 35469, complete genomeputative transporter component3e-0755.8
NC_007929:428743:447375447375448229855Lactobacillus salivarius subsp. salivarius UCC118, complete genomePhosphate-binding protein2e-0653.5
NC_011244:213853:231505231505232407903Borrelia recurrentis A1, complete genomephosphate ABC transporter, periplasmic phosphate-binding2e-0653.5
NC_012673:2368971:2374171237417123753431173Exiguobacterium sp. AT1b, complete genomeABC-type phosphate transport system periplasmic component-like protein2e-0653.1
NC_015214:1458480:147828414782841479174891Lactobacillus acidophilus 30SC chromosome, complete genomeABC-type phosphate transport system, periplasmic component3e-0652.8
NC_011026:2533017:257937225793722580289918Chloroherpeton thalassium ATCC 35110, complete genomephosphate binding protein3e-0652.4
NC_010673:205500:218838218838219743906Borrelia hermsii DAH, complete genomephosphate-binding protein5e-0652
NC_007484:2746078:274845027484502749448999Nitrosococcus oceani ATCC 19707, complete genomePhosphate binding protein7e-0651.6