Pre_GI: BLASTP Hits

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Query: NC_008593:980731:990337 Clostridium novyi NT, complete genome

Start: 990337, End: 991047, Length: 711

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012491:5628000:563935656393565640060705Brevibacillus brevis NBRC 100599, complete genomeCMP-N-acetylneuraminic acid synthetase5e-54210
NC_017187:641822:651183651183651896714Arcobacter butzleri ED-1, complete genomeacylneuraminate cytidylyltransferase3e-52205
NC_010516:2877407:289169028916902892400711Clostridium botulinum B1 str. Okra, complete genomeacylneuraminate cytidylyltransferase1e-51202
NC_013642:400651:425601425601426305705Thermotoga naphthophila RKU-10, complete genomeacylneuraminate cytidylyltransferase1e-47189
NC_007644:779376:794773794773795474702Moorella thermoacetica ATCC 39073, complete genomeAcylneuraminate cytidylyltransferase2e-47188
NC_010336:1248071:127539612753961276085690Francisella philomiragia subsp. philomiragia ATCC 25017, completeacylneuraminate cytidylyltransferase4e-47187
NC_006510:3133965:314257431425743143275702Geobacillus kaustophilus HTA426, complete genomeacylneuraminate cytidylyltransferase4e-45181
NC_015660:391627:408426408426409115690Geobacillus thermoglucosidasius C56-YS93 chromosome, completeN-acylneuraminate cytidylyltransferase4e-45181
NC_007677:771168:798197798197798907711Salinibacter ruber DSM 13855, complete genomeCMP-N-acetlyneuraminic acid synthetase2e-44179
NC_020304:3447847:345835534583553459044690Desulfocapsa sulfexigens DSM 10523, complete genomeCMP-N-acetylneuraminic acid synthetase5e-44177
NC_007955:1664998:166430716643071665023717Methanococcoides burtonii DSM 6242, complete genomeacylneuraminate cytidylyltransferase2e-43175
NC_016610:1138995:115392011539201154612693Tannerella forsythia ATCC 43037 chromosome, complete genomeputative N-acylneuraminate cytidylyltransferase1e-41169
NC_009783:649500:661285661285661977693Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein1e-41169
NC_008700:2788363:280171628017162802414699Shewanella amazonensis SB2B, complete genomeN-acylneuraminate cytidylyltransferase1e-41169
NC_016588:133943:158174158174158911738Azospirillum lipoferum 4B plasmid AZO_p6, complete sequenceN-acylneuraminate cytidylyltransferase4e-40164
NC_015497:1287877:131711313171131317793681Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeacylneuraminate cytidylyltransferase9e-40163
NC_008576:677128:678329678329679018690Magnetococcus sp. MC-1, complete genomeacylneuraminate cytidylyltransferase1e-39162
NC_007519:3240864:325590732559073256605699Desulfovibrio alaskensis G20 chromosome, complete genomeCMP-N-acetlyneuraminic acid synthetase2e-39162
NC_007575:601256:607067607067607783717Sulfurimonas denitrificans DSM 1251, complete genomeacylneuraminate cytidylyltransferase3e-39162
NC_012969:142000:154604154604155326723Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeacylneuraminate cytidylyltransferase1e-38159
NC_013922:138246:162574162574163272699Natrialba magadii ATCC 43099 chromosome, complete genomeacylneuraminate cytidylyltransferase2e-38159
NC_011769:2248902:225596122559612256725765Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeacylneuraminate cytidylyltransferase3e-38158
NC_020409:2856481:287291028729102873635726Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeCMP-N-acetlyneuraminic acid synthetase3e-38158
NC_012997:1335902:135636313563631357055693Teredinibacter turnerae T7901, complete genomeN-acylneuraminate cytidylyltransferase7e-36150
NC_015276:632206:639455639455640150696Marinomonas mediterranea MMB-1 chromosome, complete genomeN-acylneuraminate cytidylyltransferase8e-36150
CU928145:2324495:2339056233905623403211266Escherichia coli 55989 chromosome, complete genomeNnaC2e-35149
NC_011748:2324495:2339056233905623403211266Escherichia coli 55989, complete genomeNnaC2e-35149
NC_005085:4335333:435492243549224355641720Chromobacterium violaceum ATCC 12472, complete genomeN-acylneuraminate cytidylyltransferase5e-35147
NC_008571:2127369:213662021366202137333714Gramella forsetii KT0803, complete genomeN-acylneuraminate cytidylyltransferase3e-34145
NC_011884:5019500:502645450264545027146693Cyanothece sp. PCC 7425, complete genomeN-acylneuraminate cytidylyltransferase9e-33140
NC_011420:3894660:391380739138073914595789Rhodospirillum centenum SW, complete genomeacylneuraminate cytidylyltransferase, putative5e-32137
NC_008340:2614000:263480226348022635512711Alkalilimnicola ehrlichei MLHE-1, complete genomeacylneuraminate cytidylyltransferase7e-32137
NC_003910:2175305:217876321787632179458696Colwellia psychrerythraea 34H, complete genomeputative acylneuraminate cytidylyltransferase2e-31135
NC_014121:3399685:342113034211303421840711Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completePsb31e-30133
NC_015732:529201:558638558638559342705Spirochaeta caldaria DSM 7334 chromosome, complete genomeN-acylneuraminate cytidylyltransferase2e-30132
NC_016616:49388:783427834279040699Dechlorosoma suillum PS chromosome, complete genomepseudaminic acid CMP-transferase3e-30132
NC_010424:14657:256182561826319702Candidatus Desulforudis audaxviator MP104C, complete genomeacylneuraminate cytidylyltransferase5e-30131
NC_016112:806256:811118811118811804687Methylomicrobium alcaliphilum chromosome, complete genomeacylneuraminate cytidylyltransferase3e-30131
NC_020063:1659795:166877116687711669481711Enterobacteriaceae bacterium strain FGI 57, complete genomepseudaminic acid CMP-transferase6e-30130
NC_015572:1252000:126336012633601264070711Methylomonas methanica MC09 chromosome, complete genomeN-acylneuraminate cytidylyltransferase1e-29129
NC_007796:3351962:336995633699563370636681Methanospirillum hungatei JF-1, complete genomeacylneuraminate cytidylyltransferase2e-29129
NC_012850:459315:459315459315460085771Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeacylneuraminate cytidylyltransferase3e-29129
NC_015160:136055:138876138876139565690Odoribacter splanchnicus DSM 20712 chromosome, complete genomepseudaminic acid CMP-transferase3e-29128
NC_005070:419261:448496448496449197702Synechococcus sp. WH 8102, complete genomePutative acylneuraminate cytidylyltransferase3e-29128
NC_017515:76861:864748647487160687Neisseria meningitidis M04-240196 chromosome, complete genomeN-acylneuraminate cytidylyltransferase3e-29128
NC_016620:341699:378225378225378926702Bacteriovorax marinus SJ, complete genomeacylneuraminate cytidylyltransferase1e-28127
NC_013161:276000:281627281627282304678Cyanothece sp. PCC 8802, complete genomeacylneuraminate cytidylyltransferase1e-28126
NC_015276:3669263:367006936700693670758690Marinomonas mediterranea MMB-1 chromosome, complete genomeacylneuraminate cytidylyltransferase1e-28126
NC_016631:1757788:175778817577881758519732Granulicella mallensis MP5ACTX8 chromosome, complete genomeN-acylneuraminate cytidylyltransferase1e-28126
NC_012108:4118888:413799141379914138686696Desulfobacterium autotrophicum HRM2, complete genomeNeuA3e-28125
NC_007406:2615916:261777226177722618521750Nitrobacter winogradskyi Nb-255, complete genomeacylneuraminate cytidylyltransferase2e-28125
NC_008319:171847:179716179716180408693Synechococcus sp. CC9311, complete genomeCMP-N-acetylneuraminic acid synthetase2e-28125
NC_009434:4140362:415163341516334152331699Pseudomonas stutzeri A1501, complete genomeacylneuraminate cytidylyltransferase5e-28124
NC_009699:2875386:2877431287743128790921662Clostridium botulinum F str. Langeland chromosome, complete genomecytidyltransferase-like protein6e-28124
NC_015738:978794:993962993962994663702Eggerthella sp. YY7918, complete genomeCMP-N-acetylneuraminic acid synthetase8e-28124
NC_011296:463359:464871464871465566696Thermodesulfovibrio yellowstonii DSM 11347, complete genomeN-acylneuraminate cytidylyltransferase2e-27122
NC_011060:514874:523695523695524399705Pelodictyon phaeoclathratiforme BU-1, complete genomeacylneuraminate cytidylyltransferase2e-27122
NC_015276:632206:644601644601645287687Marinomonas mediterranea MMB-1 chromosome, complete genomepseudaminic acid CMP-transferase3e-27122
NC_008820:91967:115033115033115749717Prochlorococcus marinus str. MIT 9303, complete genomeCMP-N-acetylneuraminic acid synthetase5e-27121
NC_010498:3291344:3303368330336833046241257Escherichia coli SMS-3-5, complete genomepolysialic acid capsule biosynthesis N-acylneuraminate cytidylyltransferase NeuA3e-27121
NC_013508:1289159:1311656131165613129061251Edwardsiella tarda EIB202, complete genomeacylneuraminate cytidylyltransferase5e-27120
NC_020304:2677372:272820027282002728907708Desulfocapsa sulfexigens DSM 10523, complete genomeCMP-N-acetylneuraminic acid synthetase8e-27120
NC_005139:305420:325292325292325993702Vibrio vulnificus YJ016 chromosome I, complete sequenceCMP-N-acetylneuraminic acid synthetase8e-27120
NC_013421:3279499:329843432984343299132699Pectobacterium wasabiae WPP163, complete genomepseudaminic acid CMP-transferase1e-26120
NC_016815:1543308:155150115515011552205705Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceRkpN: putative acylneuraminate cytidylyltransferase1e-26120
NC_011750:3584000:3594815359481535960711257Escherichia coli IAI39 chromosome, complete genomeN-acylneuraminate cytidylyltransferase2e-26119
NC_007946:3289151:3300786330078633020421257Escherichia coli UTI89, complete genomeacylneuraminate cytidylyltransferase1e-26119
NC_008563:3362058:3373693337369333749491257Escherichia coli APEC O1, complete genomeacylneuraminate cytidylyltransferase1e-26119
NC_011742:3277941:3288485328848532897411257Escherichia coli S88 chromosome, complete genomeN-acylneuraminate cytidylyltransferase1e-26119
NC_013960:379461:394754394754395479726Nitrosococcus halophilus Nc4 chromosome, complete genomeacylneuraminate cytidylyltransferase5e-26117
NC_012779:1286500:1308142130814213093921251Edwardsiella ictaluri 93-146, complete genomeN-acylneuraminate cytidylyltransferase6e-26117
NC_012586:922095:939168939168939872705Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceRkpN, acylneuraminate cytidylyltransferase8e-26117
NC_014166:2959688:297564229756422976355714Arcobacter nitrofigilis DSM 7299 chromosome, complete genomepseudaminic acid CMP-transferase1e-25116
NC_005363:1604337:162271016227101623402693Bdellovibrio bacteriovorus HD100, complete genomeprobable acylneuraminate cytidylyltransferase1e-25116
NC_013202:1367447:139115713911571391876720Halomicrobium mukohataei DSM 12286, complete genomeN-acylneuraminate cytidylyltransferase1e-25116
NC_007498:1491223:1498715149871514998781164Pelobacter carbinolicus DSM 2380, complete genomeCMP-N-acetylneuraminic acid synthetase3e-25115
NC_014844:92148:109741109741110460720Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeacylneuraminate cytidylyltransferase1e-24113
NC_017068:2436960:248822824882282488908681Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative acylneuraminate cytidylyltransferase2e-24112
NC_013204:2826500:284319428431942843901708Eggerthella lenta DSM 2243, complete genomeacylneuraminate cytidylyltransferase5e-24111
NC_015145:3236445:3255856325585632571241269Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family8e-24110
NC_008322:1595500:160558016055801606269690Shewanella sp. MR-7, complete genomeacylneuraminate cytidylyltransferase7e-24110
NC_012881:4055962:405983640598364060534699Desulfovibrio salexigens DSM 2638, complete genomeN-acylneuraminate cytidylyltransferase7e-24110
NC_007954:1494291:150914415091441509842699Shewanella denitrificans OS217, complete genomeacylneuraminate cytidylyltransferase7e-24110
NC_016002:3704006:371518437151843715876693Pseudogulbenkiania sp. NH8B, complete genomeacylneuraminate cytidylyltransferase6e-24110
NC_015954:1739789:175828717582871759066780Halophilic archaeon DL31 chromosome, complete genomeN-acylneuraminate cytidylyltransferase1e-23109
NC_007333:1:1375913759149101152Thermobifida fusca YX, complete genomeputative transferase1e-23109
NC_020304:2677372:269441126944112695121711Desulfocapsa sulfexigens DSM 10523, complete genomepseudaminic acid CMP-transferase3e-22105
NC_013204:2234860:2243262224326222449081647Eggerthella lenta DSM 2243, complete genomeacylneuraminate cytidylyltransferase5e-22104
NC_003552:4637764:4650400465040046515721173Methanosarcina acetivorans C2A, complete genomeacylneuraminate cytidylyltransferase4e-21101
NC_008570:4594436:462784046278404628535696Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeNeuA protein3e-21101
NC_015738:1768951:1786875178687517884791605Eggerthella sp. YY7918, complete genomeCMP-N-acetylneuraminic acid synthetase8e-1994
NC_013223:724394:744298744298745020723Desulfohalobium retbaense DSM 5692, complete genomepseudaminic acid CMP-transferase2e-1789.7
NC_008319:171847:192639192639193391753Synechococcus sp. CC9311, complete genomePosttranslational flagellin modification protein B6e-1787.8
NC_007645:5397526:5406385540638554079771593Hahella chejuensis KCTC 2396, complete genomeCMP-N-acetylneuraminic acid synthetase9e-1787
NC_010170:2374852:239461223946122395232621Bordetella petrii, complete genomeN-acylneuraminate cytidylyltransferase1e-1583.2
NC_014364:4578408:4604865460486546060401176Spirochaeta smaragdinae DSM 11293 chromosome, complete genome3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family2e-1582.8
NC_015318:1455444:147029114702911471016726Hippea maritima DSM 10411 chromosome, complete genome3-deoxy-manno-octulosonate cytidylyltransferase4e-1478.6
NC_007955:1664998:167460916746091675325717Methanococcoides burtonii DSM 6242, complete genomeacylneuraminate cytidylyltransferase9e-1477
NC_015164:4023881:4045369404536940465201152Bacteroides salanitronis DSM 18170 chromosome, complete genome3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family1e-1273.6
NC_018645:2492779:250164325016432502338696Desulfobacula toluolica Tol2, complete genomeN-acylneuraminate cytidylyltransferase4e-1168.6
NC_015500:1923514:1940661194066119418151155Treponema brennaborense DSM 12168 chromosome, complete genome3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family4e-1168.6
NC_010803:2067539:208845220884522089129678Chlorobium limicola DSM 245, complete genomeacylneuraminate cytidylyltransferase9e-1167
NC_014387:497883:554235554235554987753Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeCMP-N-acetylneuraminic acid synthetase NeuA14e-1065.1
NC_000911:1611500:163507216350721635749678Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-0860.5
NC_017039:1610602:163410016341001634777678Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein1e-0860.5
NC_017052:1610500:163408816340881634765678Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein1e-0860.5
NC_007907:3722500:373473937347393735434696Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-0858.5
NC_015581:1043394:106372710637271064380654Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeacylneuraminate cytidylyltransferase4e-0755.1
NC_016745:2913712:292475629247562924998243Oceanimonas sp. GK1 chromosome, complete genomeN-acylneuraminate cytidylyltransferase4e-0755.1
NC_014033:522363:539569539569540243675Prevotella ruminicola 23 chromosome, complete genomehypothetical protein4e-0755.1
NC_006570:1526071:153010515301051530857753Francisella tularensis subsp. tularensis Schu 4, complete genome3-deoxy-manno-octulosonate cytidylyltransferase5e-0754.7
NC_008245:1525877:152991115299111530663753Francisella tularensis subsp. tularensis FSC 198, complete genome3-deoxy-D-manno-octulosonate cytidyltransferase6e-0754.3
NC_016933:1601821:160585516058551606607753Francisella tularensis TIGB03 chromosome, complete genome3-deoxy-manno-octulosonate cytidylyltransferase6e-0754.3
NC_016937:1525914:152994815299481530700753Francisella tularensis subsp. tularensis TI0902 chromosome,3-deoxy-manno-octulosonate cytidylyltransferase6e-0754.3
NC_007513:75197:99650996501010561407Synechococcus sp. CC9902, complete genomeHAD-superfamily hydrolase subfamily IA1e-0653.5
NC_011742:3277941:328079932807993281539741Escherichia coli S88 chromosome, complete genome3-deoxy-manno-octulosonate cytidylyltransferase1e-0550.4
NC_008563:3362058:336600733660073366747741Escherichia coli APEC O1, complete genome3-deoxy-manno-octulosonate cytidylyltransferase KpsU1e-0550.4
NC_007946:3289151:329310032931003293840741Escherichia coli UTI89, complete genome3-deoxy-manno-octulosonate cytidylyltransferase1e-0550.4