Pre_GI: BLASTP Hits

Some Help

Query: NC_008593:2250871:2259084 Clostridium novyi NT, complete genome

Start: 2259084, End: 2259662, Length: 579

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021182:1245692:125855112585511259117567Clostridium pasteurianum BC1, complete genomeprecorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit6e-56216
NC_014328:3482980:349029334902933490859567Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cobalt-precorrin-6Y C(15)-methyltransferase2e-55215
NC_004557:749330:7605677605677617811215Clostridium tetani E88, complete genomeprecorrin-6B methylase/decarboxylase cbiT/cbiE3e-52204
NC_017295:1507956:152163615216361522199564Clostridium acetobutylicum EA 2018 chromosome, complete genomePrecorrin-6B methylase CbiT9e-50196
NC_003030:1510000:152222215222221522785564Clostridium acetobutylicum ATCC 824, complete genomePrecorrin-6B methylase CbiT9e-50196
NC_015687:1508664:152382315238231524386564Clostridium acetobutylicum DSM 1731 chromosome, complete genomeprecorrin-6B methylase CbiT9e-50196
NC_020291:3900046:392479039247903925362573Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative cobalt-precorrin-6Y C(15)-methyltransferase CbiT2e-40164
NC_013517:1055854:109662310966231097186564Sebaldella termitidis ATCC 33386, complete genomeprecorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit6e-33140
NC_003106:1809137:183387218338721834450579Sulfolobus tokodaii str. 7, complete genomecobalt-precorrin-6Y C(15)-methyltransferase2e-32138
NC_007181:333891:339522339522340100579Sulfolobus acidocaldarius DSM 639, complete genomecobalt-precorrin-6Y C(15)-methyltransferase2e-30132
NC_014734:3086165:309718030971803097773594Paludibacter propionicigenes WB4 chromosome, complete genomeprecorriN-6y c5,15-methyltransferase (decarboxylating), cbit subunit2e-29128
NC_009633:74500:933669336693974609Alkaliphilus metalliredigens QYMF chromosome, complete genomeprecorrin-6Y C5,15-methyltransferase subunit CbiT1e-27122
NC_010001:1702350:1719119171911917210861968Clostridium phytofermentans ISDg, complete genomeprecorrin-6x reductase1e-27122
NC_011094:2061000:208804620880462088624579Salmonella enterica subsp. enterica serovar Schwarzengrund strcobalt-precorrin-6Y C(15)-methyltransferase3e-27121
NC_011149:2040396:206635820663582066936579Salmonella enterica subsp. enterica serovar Agona str. SL483,precorrin-8W decarboxylase3e-27121
NC_019903:1058657:1063940106394010651721233Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,precorrin-6y C5,15-methyltransferase subunit CbiE/precorrin-6Y C5,15-methyltransferase subunit CbiT4e-27120
NC_014633:442755:469797469797470366570Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceprecorrin-6Y C5,15-methyltransferase subunit CbiT4e-26117
NC_005126:3485330:349524134952413495810570Photorhabdus luminescens subsp. laumondii TTO1, complete genomeprecorrin-8w decarboxylase1e-24113
NC_016791:1132451:1149200114920011504081209Clostridium sp. BNL1100 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiE/precorrin-6Y C5,15-methyltransferase subunit CbiT2e-24111
NC_011898:1558208:1585938158593815871251188Clostridium cellulolyticum H10, complete genomeprecorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit6e-24110
NC_016627:4203775:4212079421207942132781200Clostridium clariflavum DSM 19732 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit,precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit8e-24110
NC_015519:488550:490219490219490833615Tepidanaerobacter sp. Re1 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiT8e-24109
NC_012962:1827000:183536618353661835935570Photorhabdus asymbiotica, complete genomeprecorrin-8w decarboxylase1e-23109
NC_012589:87592:965439654397142600Sulfolobus islandicus L.S.2.15, complete genomeprecorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit5e-22103
NC_012588:87592:965439654397142600Sulfolobus islandicus M.14.25 chromosome, complete genomecobalt-precorrin-6Y C(15)-methyltransferase5e-22103
NC_012632:87590:965419654197140600Sulfolobus islandicus M.16.27 chromosome, complete genomecobalt-precorrin-6Y C(15)-methyltransferase5e-22103
NC_013769:87582:965479654797146600Sulfolobus islandicus L.D.8.5 chromosome, complete genomeprecorrin-6Y C5,15-methyltransferase subunit CbiT5e-22103
NC_017276:85380:963909639096989600Sulfolobus islandicus REY15A chromosome, complete genomeprecorrin-6Y C5,15-methyltransferase(decarboxylating), CbiT subunit5e-22103
NC_013316:3863728:388374838837483884323576Clostridium difficile R20291, complete genomeputative cobalt-precorrin-6y C(15)-methyltransferase4e-21101
NC_009253:2927802:293890229389022939510609Desulfotomaculum reducens MI-1 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiT3e-2097.8
NC_013892:853366:863672863672864268597Xenorhabdus bovienii SS-2004 chromosome, complete genomecobalt-precorrin-6Y C(15)-methyltransferase8e-2096.7
NC_015565:624298:635012635012635614603Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completecobalt-precorrin-6Y C(15)-methyltransferase2e-1995.5
NC_014483:4957315:4967470496747049687261257Paenibacillus polymyxa E681 chromosome, complete genomeProbable cobalt-precorrin-6Y C(5)-methyltransferase (Cobalt-precorrin-6 methyltransferase)1e-1789.7
NC_021171:415771:4244844244844256891206Bacillus sp. 1NLA3E, complete genomeCbiET protein1e-1789.7
NC_009089:3998347:401834440183444018919576Clostridium difficile 630, complete genomeprobable cobalt-precorrin-6y C(15)-methyltransferase1e-1789.4
NC_014622:5315500:5325758532575853270141257Paenibacillus polymyxa SC2 chromosome, complete genomeprecorrin-6y c5,15-methyltransferase2e-1789
NC_016641:1085862:1094656109465610959121257Paenibacillus terrae HPL-003 chromosome, complete genomeprecorrin-6y c5,15-methyltransferase3e-1788.2
NC_015690:7518732:7518732751873275200091278Paenibacillus mucilaginosus KNP414 chromosome, complete genomeCbiET protein8e-1786.7
NC_012491:1263469:1276131127613112773601230Brevibacillus brevis NBRC 100599, complete genomeCbiET protein1e-1685.9
NC_009635:985935:100323410032341003797564Methanococcus aeolicus Nankai-3 chromosome, complete genomeprecorrin-6Y C5,15-methyltransferase subunit CbiT3e-1684.7
NC_006138:225832:2370572370572382651209Desulfotalea psychrophila LSv54, complete genomeprecorrin-6Y C5,15-methyltransferase (CobL)9e-1580.1
NC_007355:729498:748679748679749227549Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceprecorrin-8W decarboxylase1e-1479.3
NC_008148:672608:6765866765866777971212Rubrobacter xylanophilus DSM 9941, complete genomePrecorrin-6y C5,15-methyltransferase, subunit CbiE4e-1477.8
NC_014122:143446:144636144636145172537Methanocaldococcus infernus ME chromosome, complete genomeprecorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit3e-1375.1
NC_014165:2928464:2928464292846429297021239Thermobispora bispora DSM 43833 chromosome, complete genomeprecorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit6e-1063.9
NC_020829:636773:6589356589356601461212Pseudomonas denitrificans ATCC 13867, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiE1e-0859.7
NC_011059:1391734:1407598140759814088001203Prosthecochloris aestuarii DSM 271, complete genomeprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit2e-0755.5
NC_007796:3492438:351266835126683513228561Methanospirillum hungatei JF-1, complete genomeprecorrin-8W decarboxylase2e-0652.4