Pre_GI: BLASTP Hits

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Query: NC_008593:2250871:2255830 Clostridium novyi NT, complete genome

Start: 2255830, End: 2256576, Length: 747

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004557:749330:764247764247764972726Clostridium tetani E88, complete genomeprecorrin-3B C17-methyltransferase2e-87322
NC_021182:1245692:126186512618651262581717Clostridium pasteurianum BC1, complete genomeprecorrin-3B C17-methyltransferase5e-82303
NC_017295:1507956:152443215244321525148717Clostridium acetobutylicum EA 2018 chromosome, complete genomeprecorrin-3B C(17)-methyltransferase6e-82303
NC_003030:1510000:152501815250181525734717Clostridium acetobutylicum ATCC 824, complete genomeprecorrin-3B C17-methyltransferase6e-82303
NC_015687:1508664:152661915266191527335717Clostridium acetobutylicum DSM 1731 chromosome, complete genomeprecorrin-3B C17-methyltransferase6e-82303
NC_014328:3482980:348689334868933487615723Clostridium ljungdahlii ATCC 49587 chromosome, complete genomecobalt-precorrin-3B C(17)-methyltransferase1e-81302
NC_009617:1487110:149149514914951492217723Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeprecorrin-3B C(17)-methyltransferase4e-81301
NC_013316:3863728:388117638811763881901726Clostridium difficile R20291, complete genomecobalt-precorrin-3b c(17)-methyltransferase3e-60231
NC_009089:3998347:401577240157724016497726Clostridium difficile 630, complete genomecobalt-precorrin-3b c(17)-methyltransferase2e-59229
NC_014633:442755:472950472950473675726Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceprecorrin-3 methyltransferase4e-59228
NC_010382:3350816:3367306336730633689731668Lysinibacillus sphaericus C3-41, complete genomecobalt-precorrin-3B C(17)-methyltransferase3e-57221
NC_014734:3086165:310047331004733101207735Paludibacter propionicigenes WB4 chromosome, complete genomeprecorriN-3 methyltransferase2e-55215
NC_013517:1055854:109968810996881100410723Sebaldella termitidis ATCC 33386, complete genomeprecorrin-3B C17-methyltransferase8e-55213
NC_014622:5315500:5330981533098153327921812Paenibacillus polymyxa SC2 chromosome, complete genomeprecorrin-3B C(17)-methyltransferase1e-54212
NC_014483:4957315:4972779497277949745571779Paenibacillus polymyxa E681 chromosome, complete genomeCobalt-precorrin-3B C(17)-methyltransferase (Cobalt-precorrin-3 methyltransferase)2e-54212
NC_016641:1085862:1099871109987111017091839Paenibacillus terrae HPL-003 chromosome, complete genomecobalt-precorrin-3B C(17)-methyltransferase5e-54211
NC_021171:415771:4188744188744205231650Bacillus sp. 1NLA3E, complete genomeprecorrin 3 methylase1e-53209
NC_009633:74500:965799657997319741Alkaliphilus metalliredigens QYMF chromosome, complete genomeprecorrin-3B C(17)-methyltransferase2e-53209
NC_015565:624298:637421637421638131711Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeprecorrin-3B C17-methyltransferase7e-53207
NC_012491:1263469:1270856127085612726131758Brevibacillus brevis NBRC 100599, complete genomeprecorrin-3 methylase8e-53207
NC_010001:1702350:171834817183481719076729Clostridium phytofermentans ISDg, complete genomeprecorrin-3B C17-methyltransferase1e-52206
NC_005126:3485330:349271434927143493439726Photorhabdus luminescens subsp. laumondii TTO1, complete genomeprecorrin-3B C17-methyltransferase3e-52204
NC_012962:1827000:183773718377371838462726Photorhabdus asymbiotica, complete genomeprecorrin-3b c17-methyltransferase (precorrin-3 methyltransferase (precorrin-3 methylase)3e-52204
NC_006138:225832:239958239958240728771Desulfotalea psychrophila LSv54, complete genomeprecorrin-3B C17-methyltransferase (CobJ)4e-52204
NC_015690:7518732:7524198752419875260931896Paenibacillus mucilaginosus KNP414 chromosome, complete genomeprecorrin-3 methylase2e-51202
NC_013892:853366:861121861121861846726Xenorhabdus bovienii SS-2004 chromosome, complete genomecobalt-precorrin-3B C(17)-methyltransferase3e-51201
NC_011094:2061000:208552820855282086253726Salmonella enterica subsp. enterica serovar Schwarzengrund strprecorrin-3B C(17)-methyltransferase5e-51201
NC_011149:2040396:206384020638402064565726Salmonella enterica subsp. enterica serovar Agona str. SL483,precorrin-3B C17-methyltransferase1e-50200
NC_015519:488550:493294493294494025732Tepidanaerobacter sp. Re1 chromosome, complete genomeprecorrin-3B C17-methyltransferase2e-50199
NC_016791:1132451:114214511421451142879735Clostridium sp. BNL1100 chromosome, complete genomeprecorrin-3B C(17)-methyltransferase4e-50198
NC_008148:672608:6777946777946794791686Rubrobacter xylanophilus DSM 9941, complete genomeprecorrin-3B C17-methyltransferase4e-48191
NC_007181:333891:341130341130341885756Sulfolobus acidocaldarius DSM 639, complete genomeprecorrin-3B C17-methyltransferase1e-47189
NC_011898:1558208:157887715788771579611735Clostridium cellulolyticum H10, complete genomeprecorrin-3B C17-methyltransferase8e-47187
NC_003106:1809137:183548318354831836244762Sulfolobus tokodaii str. 7, complete genomeprecorrin-3B C17-methyltransferase3e-46185
NC_009253:2927802:293631229363122937022711Desulfotomaculum reducens MI-1 chromosome, complete genomeprecorrin-3B C(17)-methyltransferase4e-46184
NC_007355:729498:751701751701752501801Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceprecorrin-3B C17-methyltransferase5e-46184
NC_007513:1900000:1901899190189919035121614Synechococcus sp. CC9902, complete genomePrecorrin-3B C17-methyltransferase region1e-45183
NC_011059:1391734:1408793140879314102021410Prosthecochloris aestuarii DSM 271, complete genomeprecorrin-3B C17-methyltransferase2e-45182
NC_015636:379000:395975395975396733759Methanothermococcus okinawensis IH1 chromosome, complete genomeprecorrin-3B C17-methyltransferase1e-44179
NC_019903:1058657:106786010678601068546687Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,precorrin-3 methyltransferase1e-43176
NC_015574:2501869:2506408250640825074691062Methanobacterium sp. SWAN-1 chromosome, complete genomeprecorrin-3B C17-methyltransferase2e-41169
NC_016627:4203775:421953742195374220262726Clostridium clariflavum DSM 19732 chromosome, complete genomeprecorrin-3B C(17)-methyltransferase4e-41168
NC_012589:87592:981899818998935747Sulfolobus islandicus L.S.2.15, complete genomeprecorrin-3B C17-methyltransferase3e-39162
NC_017276:85380:980369803698782747Sulfolobus islandicus REY15A chromosome, complete genomeprecorrin-3B C(17)-methyltransferase4e-39161
NC_012632:87590:981879818798933747Sulfolobus islandicus M.16.27 chromosome, complete genomeprecorrin-3B C(17)-methyltransferase4e-39161
NC_012588:87592:981899818998935747Sulfolobus islandicus M.14.25 chromosome, complete genomeprecorrin-3B C(17)-methyltransferase4e-39161
NC_013769:87582:981939819398939747Sulfolobus islandicus L.D.8.5 chromosome, complete genomeprecorrin-3B C(17)-methyltransferase6e-39160
NC_008817:1476473:1504223150422315060371815Prochlorococcus marinus str. MIT 9515, complete genomebifunctional cbiH protein and precorrin-3B C17-methyltransferase8e-37153
NC_005072:1458799:1466807146680714686271821Prochlorococcus marinus subsp. pastoris str. CCMP1986, completebifunctional cbiH protien and PRECORRIN-3B C17-METHYLTRANSFERASE8e-36150
NC_007577:1517000:1517268151726815190881821Prochlorococcus marinus str. MIT 9312, complete genomeprecorrin-3B C17-methyltransferase7e-34144
NC_009840:1485383:1544035154403515458371803Prochlorococcus marinus str. MIT 9215, complete genomebifunctional cbiH protein and precorrin-3B C17-methyltransferase1e-33143
NC_009091:1423677:1451388145138814531901803Prochlorococcus marinus str. MIT 9301, complete genomebifunctional cbiH protein and precorrin-3B C17-methyltransferase8e-34143
NC_020829:636773:6541906541906558391650Pseudomonas denitrificans ATCC 13867, complete genomeprecorrin-3B C17-methyltransferase2e-30132
NC_015656:2795784:2799166279916628010701905Frankia symbiont of Datisca glomerata chromosome, complete genomeprecorrin-3B C17-methyltransferase3e-30132
NC_021177:4258102:4271844427184442733791536Streptomyces fulvissimus DSM 40593, complete genomePrecorrin-3B C17-methyltransferase1e-28126
NC_015065:232240:2417502417502432731524Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceprecorrin-3B C17-methyltransferase4e-27121
NC_016789:1232993:1252219125221912537151497Corynebacterium diphtheriae PW8 chromosome, complete genomeputative bifunctional cobalamin biosynthesis protein1e-26120
NC_016800:1219121:1236650123665012381461497Corynebacterium diphtheriae BH8 chromosome, complete genomeputative bifunctional cobalamin biosynthesis protein1e-26120
NC_016783:1216708:1234119123411912356151497Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative bifunctional cobalamin biosynthesis protein1e-26120
NC_014166:2149984:215664721566472157426780Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeprecorrin-3B C(17)-methyltransferase2e-26119
NC_013159:1807599:1831240183124018327721533Saccharomonospora viridis DSM 43017, complete genomeprecorrin-2 C20-methyltransferase2e-25116
NC_011758:326366:328427328427329197771Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeprecorrin-3B C17-methyltransferase2e-25116
NC_007434:2290934:2307445230744523093041860Burkholderia pseudomallei 1710b chromosome I, complete sequenceprecorrin-3b C17-methyltransferase4e-25115
NC_008595:2432184:2452417245241724539071491Mycobacterium avium 104, complete genomecobalamin biosynthesis protein cobIJ7e-23107
NC_010511:2703684:270511927051192705970852Methylobacterium sp. 4-46 chromosome, complete genomeprecorrin-3B C(17)-methyltransferase2e-1582.4
NC_013517:1055854:109592510959251096548624Sebaldella termitidis ATCC 33386, complete genomeprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit2e-0962.8
NC_015636:1061736:108212510821251082742618Methanothermococcus okinawensis IH1 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiE4e-0858.5
NC_015519:488550:489620489620490261642Tepidanaerobacter sp. Re1 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiE6e-0857.8
NC_007681:1608223:163099416309941631617624Methanosphaera stadtmanae DSM 3091, complete genomeCbiE1e-0756.6
NC_014934:2482934:248639624863962487190795Cellulophaga algicola DSM 14237 chromosome, complete genomeuroporphyrinogen-iii c-methyltransferase4e-0755.1
NC_021182:1245692:125783312578331258570738Clostridium pasteurianum BC1, complete genomeprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit4e-0755.1
NC_014829:988980:100077810007781001563786Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeuroporphyrin-III C-methyltransferase7e-0754.3
NC_017276:85380:932699326993952684Sulfolobus islandicus REY15A chromosome, complete genomeprecorrin-6y C5,15-methyltransferase(decarboxylating), CbiE subunit1e-0653.9
NC_012632:87590:934209342094103684Sulfolobus islandicus M.16.27 chromosome, complete genomecobalt-precorrin-6Y C(5)-methyltransferase1e-0653.5
NC_012588:87592:934229342294105684Sulfolobus islandicus M.14.25 chromosome, complete genomecobalt-precorrin-6Y C(5)-methyltransferase1e-0653.5
NC_014633:442755:4798304798304813021473Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceuroporphyrinogen-III C-methyltransferase ;uroporphyrinogen-III synthase2e-0653.1
NC_015565:624298:634393634393635019627Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeprecorrin-6y C5,15-methyltransferase , CbiE subunit2e-0653.1
NC_010001:1702350:1719119171911917210861968Clostridium phytofermentans ISDg, complete genomeprecorrin-6x reductase3e-0652.4
NC_013769:87582:934269342694109684Sulfolobus islandicus L.D.8.5 chromosome, complete genomeprecorrin-6y C5,15-methyltransferase subunit CbiE3e-0652
NC_012589:87592:934229342294105684Sulfolobus islandicus L.S.2.15, complete genomeprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit3e-0652
NC_014633:442755:469171469171469800630Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceprecorrin-6Y C5,15-methyltransferase7e-0651.2