Pre_GI: BLASTP Hits

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Query: NC_008563:4739333:4758048 Escherichia coli APEC O1, complete genome

Start: 4758048, End: 4759517, Length: 1470

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:4655373:4672710467271046741791470Escherichia coli S88 chromosome, complete genomemembrane protein0889
NC_004431:4270305:4288246428824642897151470Escherichia coli CFT073, complete genomePutative antiporter0889
NC_004431:4270305:4284198428419842856971500Escherichia coli CFT073, complete genomePutative amino acid antiporter6e-135481
NC_008563:4739333:4762066476206647635651500Escherichia coli APEC O1, complete genomeputative amino acid antiporter6e-135481
NC_015470:831863:8362268362268376861461Chlamydophila psittaci 6BC chromosome, complete genomearginine/ornithine antiporter1e-116420
NC_017289:834781:8367598367598382191461Chlamydophila psittaci 01DC11 chromosome, complete genomearginine/ornithine antiporter1e-116420
NC_017291:829577:8339408339408354001461Chlamydophila psittaci C19/98 chromosome, complete genomeamino acid permease1e-116420
NC_017292:834749:8367278367278381871461Chlamydophila psittaci 02DC15 chromosome, complete genomearginine/ornithine antiporter1e-116420
NC_012815:1465670:1479713147971314812481536Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeputative arginine/ornithine antiporter9e-84311
NC_012814:1465738:1479781147978114813161536Bifidobacterium animalis subsp. lactis Bl-04, complete genomeputative arginine/ornithine antiporter9e-84311
NC_009348:2034500:2038628203862820400641437Aeromonas salmonicida subsp. salmonicida A449, complete genomearginine/ornithine antiporter4e-82305
NC_015391:2059191:2059191205919120606181428Carnobacterium sp. 17-4 chromosome, complete genomearginine/ornithine antiporter6e-79295
NC_016641:5808113:5834570583457058359851416Paenibacillus terrae HPL-003 chromosome, complete genomearginine/ornithine antiporter2e-75283
NC_021064:1705961:1716405171640517178861482Propionibacterium avidum 44067, complete genomeArginine/ornithine antiporter ArcD1e-70267
NC_013971:1927510:1930022193002219314131392Erwinia amylovora ATCC 49946 chromosome, complete genomearginine/ornithine antiporter2e-70267
NC_013961:1891000:1892495189249518938861392Erwinia amylovora, complete genomeputative APA family amino acid transporter2e-70267
NC_020829:5174354:5224533522453352259811449Pseudomonas denitrificans ATCC 13867, complete genomearginine/ornithine antiporter3e-69263
NC_015410:2258800:2258800225880022602271428Pseudomonas mendocina NK-01 chromosome, complete genomearginine/ornithine antiporter3e-69263
NC_012214:1974500:2006813200681320082071395Erwinia pyrifoliae Ep1/96, complete genomePutative arginine/ornithine antiporter YdgI1e-67257
NC_012590:1004816:1004816100481610063031488Corynebacterium aurimucosum ATCC 700975, complete genomeL-lysine transport protein3e-63243
NC_014121:4577324:4585647458564745870231377Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeArginine/ornithine antiporter5e-63242
NC_011663:1500772:1509093150909315104931401Shewanella baltica OS223 chromosome, complete genomeamino acid permease-associated protein1e-62241
NC_008463:4342119:4342119434211943435371419Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable amino acid permease1e-59231
NC_008800:1942000:1947359194735919488611503Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,amino acid permease1e-59230
NC_011770:4542183:4542183454218345436011419Pseudomonas aeruginosa LESB58, complete genomeputative amino acid permease1e-58228
NC_017387:1110412:1112344111234411136781335Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomearginine/ornithine antiporter6e-59228
NC_017093:2357583:2371047237104723724471401Actinoplanes missouriensis 431, complete genomeputative amino acid permease7e-53208
NC_003366:64908:7853478534798561323Clostridium perfringens str. 13, complete genomeprobable integral membrane transport protein1e-22108
NC_010067:3247169:3268853326885332701901338Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-20101
NC_016614:1543333:1565362156536215666991338Vibrio sp. EJY3 chromosome 2, complete sequenceamino acid transporter permease4e-2099.8
NC_016614:1543333:1562996156299615643391344Vibrio sp. EJY3 chromosome 2, complete sequenceputrescine transporter3e-1480.5
NC_004459:2025436:2050577205057720519141338Vibrio vulnificus CMCP6 chromosome I, complete sequenceCadaverine/lysine antiporter9e-1375.5
NC_014965:997344:1035756103575610370931338Vibrio vulnificus MO6-24/O chromosome I, complete sequencelysine/cadaverine antiporter membrane protein CadB9e-1375.5
NC_008253:334467:3485133485133498231311Escherichia coli 536, complete genomeamino acid permease2e-1274.7
NC_010793:721944:7407807407807420631284Orientia tsutsugamushi str. Ikeda, complete genomeamino acid transporter5e-1273.2
NC_017986:5867782:5881998588199858833381341Pseudomonas putida ND6 chromosome, complete genomeputrescine transporter9e-1272
NC_009512:2782000:2793078279307827944181341Pseudomonas putida F1, complete genomeamino acid permease-associated region9e-1272
NC_010468:4252940:4274436427443642757701335Escherichia coli ATCC 8739, complete genomearginine/ornithine antiporter5e-1169.7
CP002797:4411763:4434911443491144362451335Escherichia coli NA114, complete genomeLysine/cadaverine antiporter membrane protein CadB5e-1169.7
NC_013361:5319497:5324994532499453263281335Escherichia coli O26:H11 str. 11368 chromosome, complete genomelysine/cadaverine antiporter5e-1169.7
NC_021066:4177217:4184900418490041862521353Raoultella ornithinolytica B6, complete genomeputative cationic amino acid permease2e-1067.8
NC_004741:4364235:4383674438367443847261053Shigella flexneri 2a str. 2457T, complete genome5e-0962.8
NC_013508:275081:2913392913392926341296Edwardsiella tarda EIB202, complete genomeputrescine transport protein3e-0860.5
NC_007296:1762000:1772812177281217741551344Streptococcus pyogenes MGAS6180, complete genomeamino acid permease4e-0859.7
NC_018604:789575:7934247934247947071284Brachyspira pilosicoli WesB complete genomeamino acid permease4e-0756.6
NC_019908:1225690:1237862123786212391451284Brachyspira pilosicoli P43/6/78 chromosome, complete genomeamino acid permease4e-0756.6
NC_018607:662697:6666196666196678271209Brachyspira pilosicoli B2904 chromosome, complete genomeamino acid permease4e-0756.6
NC_014330:2026193:2030006203000620313251320Brachyspira pilosicoli 95/1000 chromosome, complete genomeamino acid permease5e-0756.2
NC_014150:3085013:3089069308906930903521284Brachyspira murdochii DSM 12563 chromosome, complete genomeamino acid permease-associated region2e-0654.7