Pre_GI: BLASTP Hits

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Query: NC_008563:4739333:4745961 Escherichia coli APEC O1, complete genome

Start: 4745961, End: 4747415, Length: 1455

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:4655373:4660479466047946620771599Escherichia coli S88 chromosome, complete genomehypothetical protein1e-178626
NC_013716:5201097:5257052525705252586681617Citrobacter rodentium ICC168, complete genomehypothetical protein3e-175615
NC_013941:3300000:3329451332945133306951245Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein5e-97355
NC_013008:3525428:3550716355071635519241209Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein5e-97355
NC_002695:3468873:3491695349169534929631269Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-97355
NC_009792:3245368:3280853328085332822231371Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-96353
NC_002655:3538656:355933835593383560246909Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-94347
NC_014562:2563466:2589710258971025908671158Pantoea vagans C9-1 chromosome, complete genomehypothetical protein9e-79294
NC_011353:3573641:3595841359584135970551215Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein4e-75282
NC_004431:4270305:430243343024334302867435Escherichia coli CFT073, complete genome2e-60233
NC_004431:4270305:430157443015744302017444Escherichia coli CFT073, complete genome6e-1892.4
NC_016945:300000:3029233029233041161194Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein7e-1169.3
NC_016446:26500:2935329353305941242Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein7e-1169.3
NC_012667:1045782:1056197105619710574501254Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein7e-1168.9
NC_002506:298868:3029263029263041491224Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein7e-1168.9
NC_012580:301500:3041133041133053481236Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein2e-1067.8
NC_012583:335000:3377893377893390181230Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein2e-1067.8