Pre_GI: BLASTP Hits

Some Help

Query: NC_008563:3332114:3337436 Escherichia coli APEC O1, complete genome

Start: 3337436, End: 3337999, Length: 564

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:3245500:325222032522203252783564Escherichia coli S88 chromosome, complete genome5e-108389
NC_004431:4955658:496228449622844962847564Escherichia coli CFT073, complete genomeHypothetical protein ybdM5e-108389
CU928145:3360967:339306533930653393709645Escherichia coli 55989 chromosome, complete genometranscriptional regulator IbrB1e-96352
NC_011748:3360967:339306533930653393709645Escherichia coli 55989, complete genometranscriptional regulator IbrB1e-96352
NC_002655:1103991:112718511271851127823639Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-94345
NC_004431:2304280:232484223248422325486645Escherichia coli CFT073, complete genomeHypothetical protein ybdM2e-94344
NC_007946:2155454:217600721760072176651645Escherichia coli UTI89, complete genomehypothetical protein YbdM2e-94344
NC_008253:2056734:207731920773192077963645Escherichia coli 536, complete genomehypothetical protein2e-94344
NC_010498:1117938:114637011463701147014645Escherichia coli SMS-3-5, complete genome2e-93340
NC_016832:4425330:443249844324984433139642Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-76284
NC_012125:4536383:454357745435774544191615Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-75279
NC_003198:4453457:446065244606524461266615Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-75279
CP002797:2062006:207094420709442071438495Escherichia coli NA114, complete genomehypothetical protein1e-65248
NC_011750:1094000:111078111107811111275495Escherichia coli IAI39 chromosome, complete genome1e-65248
NC_015567:1206727:122435612243561224973618Serratia sp. AS9 chromosome, complete genomeParB domain-containing protein nuclease2e-55214
NC_015566:1206500:122417112241711224788618Serratia sp. AS12 chromosome, complete genomeParB domain-containing protein nuclease2e-55214
NC_012779:2856051:287655228765522877181630Edwardsiella ictaluri 93-146, complete genomeIbrB1e-53208
NC_010170:1417615:142397114239711424603633Bordetella petrii, complete genomehypothetical protein7e-42169
NC_012779:2856051:286924828692482869880633Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-40165
NC_014618:4114004:414571541457154146173459Enterobacter cloacae SCF1 chromosome, complete genomeimmunoglobulin-binding regulator9e-27119
NC_014933:3015678:303458330345833035119537Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator3e-25114
NC_004668:546142:570062570062570595534Enterococcus faecalis V583, complete genomeParB-like nuclease domain protein5e-24110
NC_014624:1675500:173395517339551734491537Eubacterium limosum KIST612 chromosome, complete genomeimmunoglobulin-binding regulator B6e-24110
NC_016776:5174606:524234452423445242865522Bacteroides fragilis 638R, complete genomehypothetical protein1e-22106
NC_009614:4565620:457340945734094573930522Bacteroides vulgatus ATCC 8482 chromosome, complete genometranscriptional regulator1e-22106
NC_016776:2411154:244351324435132444025513Bacteroides fragilis 638R, complete genomehypothetical protein2e-2098.6
NC_004663:2859158:288469928846992885211513Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein2e-2098.6