Pre_GI: BLASTP Hits

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Query: NC_008563:1175035:1188797 Escherichia coli APEC O1, complete genome

Start: 1188797, End: 1189093, Length: 297

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:1177946:119238611923861192682297Escherichia coli S88 chromosome, complete genomeRegulatory protein CII from phage origin2e-52203
NC_004431:1401681:141356214135621413858297Escherichia coli CFT073, complete genomePutative Regulatory protein CII of bacteriophage2e-52203
NC_007946:1239278:125141012514101251706297Escherichia coli UTI89, complete genomeputative regulatory protein CII of bacteriophage2e-52203
NC_011740:2072173:210936321093632109659297Escherichia fergusonii ATCC 35469, complete genomeRegulatory protein CII from phage origin1e-50198
NC_017328:303987:318738318738319034297Shigella flexneri 2002017 chromosome, complete genomeputative regulatory protein CII of bacteriophage2e-50197
NC_011601:1039500:105289810528981053194297Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeregulatory protein4e-50196
NC_011353:3276734:328109632810963281392297Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage CII protein2e-49194
NC_013008:3231414:323596732359673236263297Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeregulatory protein CII of bacteriophage BP-933W2e-49194
NC_011601:717072:731767731767732066300Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeregulatory protein1e-48191
NC_011601:2614691:261888226188822619178297Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeregulatory protein2e-47187
NC_011751:1405381:142031414203141420613300Escherichia coli UMN026 chromosome, complete genomeregulatory protein CII from phage origin4e-47186
NC_013941:975353:990356990356990655300Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeregulatory protein CII2e-46184
NC_013364:2645438:265155626515562651852297Escherichia coli O111:H- str. 11128, complete genomeputative phage regulatory protein CII4e-45179
NC_012947:3015985:302095330209533021252300Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeCII family protein1e-44178
NC_013361:1558423:157164615716461571942297Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage regulatory protein CII3e-44176
NC_013364:1183000:119531211953121195608297Escherichia coli O111:H- str. 11128, complete genomeputative phage regulatory protein3e-43173
NC_013353:5361207:537804653780465378342297Escherichia coli O103:H2 str. 12009, complete genomephage regulatory protein CII3e-43173
NC_002655:1332961:134405513440551344351297Escherichia coli O157:H7 EDL933, complete genomeputative regulatory protein CII of bacteriophage BP-933W3e-43173
AP010958:5361207:537804653780465378342297Escherichia coli O103:H2 str. 12009 DNA, complete genomephage regulatory protein CII3e-43173
NC_009800:289000:302472302472302768297Escherichia coli HS, complete genomebacteriophage CII protein7e-42169
NC_013361:3112023:312917331291733129469297Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage regulatory protein CII1e-41168
NC_013941:3300000:330197933019793302275297Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeCII protein1e-41168
NC_013282:1200993:121548112154811215762282Cronobacter turicensis, complete genomehypothetical protein3e-37153
NC_013008:306953:306953306953307246294Escherichia coli O157:H7 str. TW14359 chromosome, complete genomecII antiterminator protein for prophage CP-933H8e-0855.8
NC_002695:301939:303072303072303365294Escherichia coli O157:H7 str. Sakai, complete genomecII8e-0855.8
NC_002655:301940:303073303073303366294Escherichia coli O157:H7 EDL933, complete genomeputative cII antiterminator protein for prophage CP-933H8e-0855.8
NC_007946:2625461:262931726293172629610294Escherichia coli UTI89, complete genomebacteriophage 343 regulatory protein CII2e-0755.1