Pre_GI: BLASTP Hits

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Query: NC_008542:2631138:2639179 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Start: 2639179, End: 2640492, Length: 1314

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008060:1945597:1953638195363819549511314Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencehypothetical protein0916
NC_009439:3485000:3494009349400934953221314Pseudomonas mendocina ymp, complete genomehypothetical protein6e-145514
NC_008700:3692333:3700897370089737022071311Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein4e-129461
NC_009512:27783:3543235432364661035Pseudomonas putida F1, complete genomehypothetical protein2e-0963.9
NC_010322:29983:3605236052372481197Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein2e-0963.9
NC_010501:30000:356793567936488810Pseudomonas putida W619, complete genomehypothetical protein3e-0963.5